PTR35_ARATH
ID PTR35_ARATH Reviewed; 521 AA.
AC Q9LSE8;
DT 02-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Protein NRT1/ PTR FAMILY 4.2;
DE Short=AtNPF4.2;
DE AltName: Full=Protein ABA-IMPORTING TRANSPORTER 4;
GN Name=NPF4.2; Synonyms=AIT4; OrderedLocusNames=At3g25280; ORFNames=MJL12.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP TISSUE SPECIFICITY, AND GENE FAMILY.
RX PubMed=17481610; DOI=10.1016/j.febslet.2007.04.047;
RA Tsay Y.F., Chiu C.C., Tsai C.B., Ho C.H., Hsu P.K.;
RT "Nitrate transporters and peptide transporters.";
RL FEBS Lett. 581:2290-2300(2007).
RN [4]
RP GENE FAMILY.
RX PubMed=20501909; DOI=10.1105/tpc.110.075242;
RA Li J.Y., Fu Y.L., Pike S.M., Bao J., Tian W., Zhang Y., Chen C.Z.,
RA Zhang Y., Li H.M., Huang J., Li L.G., Schroeder J.I., Gassmann W.,
RA Gong J.M.;
RT "The Arabidopsis nitrate transporter NRT1.8 functions in nitrate removal
RT from the xylem sap and mediates cadmium tolerance.";
RL Plant Cell 22:1633-1646(2010).
RN [5]
RP FUNCTION.
RX PubMed=22645333; DOI=10.1073/pnas.1203567109;
RA Kanno Y., Hanada A., Chiba Y., Ichikawa T., Nakazawa M., Matsui M.,
RA Koshiba T., Kamiya Y., Seo M.;
RT "Identification of an abscisic acid transporter by functional screening
RT using the receptor complex as a sensor.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:9653-9658(2012).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24055139; DOI=10.1016/j.tplants.2013.08.008;
RA Leran S., Varala K., Boyer J.C., Chiurazzi M., Crawford N.,
RA Daniel-Vedele F., David L., Dickstein R., Fernandez E., Forde B.,
RA Gassmann W., Geiger D., Gojon A., Gong J.M., Halkier B.A., Harris J.M.,
RA Hedrich R., Limami A.M., Rentsch D., Seo M., Tsay Y.F., Zhang M.,
RA Coruzzi G., Lacombe B.;
RT "A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family
RT members in plants.";
RL Trends Plant Sci. 19:5-9(2014).
CC -!- FUNCTION: Involved in abscisic acid transport.
CC {ECO:0000269|PubMed:22645333}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in siliques.
CC {ECO:0000269|PubMed:17481610}.
CC -!- SIMILARITY: Belongs to the major facilitator superfamily. Proton-
CC dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
CC {ECO:0000305}.
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DR EMBL; AB026647; BAB02087.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE77004.1; -; Genomic_DNA.
DR RefSeq; NP_189165.1; NM_113434.1.
DR AlphaFoldDB; Q9LSE8; -.
DR SMR; Q9LSE8; -.
DR TCDB; 2.A.17.3.12; the proton-dependent oligopeptide transporter (pot/ptr) family.
DR PaxDb; Q9LSE8; -.
DR PRIDE; Q9LSE8; -.
DR ProteomicsDB; 226421; -.
DR EnsemblPlants; AT3G25280.1; AT3G25280.1; AT3G25280.
DR GeneID; 822122; -.
DR Gramene; AT3G25280.1; AT3G25280.1; AT3G25280.
DR KEGG; ath:AT3G25280; -.
DR Araport; AT3G25280; -.
DR TAIR; locus:2090230; AT3G25280.
DR eggNOG; KOG1237; Eukaryota.
DR HOGENOM; CLU_009313_4_0_1; -.
DR InParanoid; Q9LSE8; -.
DR OMA; LNYNFWM; -.
DR OrthoDB; 365203at2759; -.
DR PhylomeDB; Q9LSE8; -.
DR PRO; PR:Q9LSE8; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LSE8; baseline and differential.
DR Genevisible; Q9LSE8; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR Gene3D; 1.20.1250.20; -; 1.
DR InterPro; IPR036259; MFS_trans_sf.
DR InterPro; IPR000109; POT_fam.
DR PANTHER; PTHR11654; PTHR11654; 1.
DR Pfam; PF00854; PTR2; 1.
DR SUPFAM; SSF103473; SSF103473; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..521
FT /note="Protein NRT1/ PTR FAMILY 4.2"
FT /id="PRO_0000399969"
FT TRANSMEM 30..50
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 65..85
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 89..109
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 133..153
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 172..192
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 204..224
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 297..317
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 338..358
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 381..401
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 413..433
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 451..471
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 498..518
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 521 AA; 58353 MW; 750C7125E993BEA1 CRC64;
MENDMEEKFE DWKGKEAIPG KHGGIRAASI VCVVVMMENI VFIANGFNFV KYFMGSMHYT
PATAANMVTN FMGTSFLLTL FGGFIADSFV THFTTFIVFC CIELMGLILL TFQAHNPKLL
PEKDKTPSTL QSAILFTGLY AMAIGTGGLK ASLPSHGGDQ IDRRNPRLIS RFFDWLYFSI
CSGCLLAVTV VLWIEEKKGW IWSFNISVGI LATALCIFTV GLPFYRFKRP NGSPLKKIAI
VIISAARNRN KSDLDEEMMR GLISIYKNNS HNKLKWIDKA TLNKNISETE VEETRTFLGL
LPIFGSTIVM SCCVAQLSTF SAQQGMLMNK KLFHSFEIPV PSLTAIPLIF MLLSIPLYEF
FGKKISSGNN NRSSSFNLKR IGLGLALSSV SMAVSAIVEA KRKHEVVHNN FRISVLWLVF
QYLMLSVSDM LTLGGMLEFF YREAPSNMKS ISTALGWCST ALGFFLSTTL VEVTNAVTGR
LGHQWLGGED LNKTRLELFY VLLCVLNTLN LLNYIFWAKR Y