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PTR40_ARATH
ID   PTR40_ARATH             Reviewed;         516 AA.
AC   Q9M174;
DT   02-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 105.
DE   RecName: Full=Putative protein NRT1/ PTR FAMILY 2.2;
DE            Short=AtNPF2.2;
DE   AltName: Full=Protein NAXT1-like 3;
DE   AltName: Full=Putative nitrate excretion transporter 4;
GN   Name=NPF2.2; OrderedLocusNames=At3g45690; ORFNames=T6D9.20;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130713; DOI=10.1038/35048706;
RA   Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA   Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA   Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA   Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA   Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA   Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA   Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA   Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA   Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA   Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA   Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA   de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA   Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA   Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA   Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA   Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA   Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA   Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA   Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA   Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA   Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA   Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT   "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL   Nature 408:820-822(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   TISSUE SPECIFICITY, AND GENE FAMILY.
RX   PubMed=17481610; DOI=10.1016/j.febslet.2007.04.047;
RA   Tsay Y.F., Chiu C.C., Tsai C.B., Ho C.H., Hsu P.K.;
RT   "Nitrate transporters and peptide transporters.";
RL   FEBS Lett. 581:2290-2300(2007).
RN   [4]
RP   IDENTIFICATION.
RX   PubMed=17993627; DOI=10.1105/tpc.106.048173;
RA   Segonzac C., Boyer J.C., Ipotesi E., Szponarski W., Tillard P.,
RA   Touraine B., Sommerer N., Rossignol M., Gibrat R.;
RT   "Nitrate efflux at the root plasma membrane: identification of an
RT   Arabidopsis excretion transporter.";
RL   Plant Cell 19:3760-3777(2007).
RN   [5]
RP   GENE FAMILY.
RX   PubMed=20501909; DOI=10.1105/tpc.110.075242;
RA   Li J.Y., Fu Y.L., Pike S.M., Bao J., Tian W., Zhang Y., Chen C.Z.,
RA   Zhang Y., Li H.M., Huang J., Li L.G., Schroeder J.I., Gassmann W.,
RA   Gong J.M.;
RT   "The Arabidopsis nitrate transporter NRT1.8 functions in nitrate removal
RT   from the xylem sap and mediates cadmium tolerance.";
RL   Plant Cell 22:1633-1646(2010).
RN   [6]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=24055139; DOI=10.1016/j.tplants.2013.08.008;
RA   Leran S., Varala K., Boyer J.C., Chiurazzi M., Crawford N.,
RA   Daniel-Vedele F., David L., Dickstein R., Fernandez E., Forde B.,
RA   Gassmann W., Geiger D., Gojon A., Gong J.M., Halkier B.A., Harris J.M.,
RA   Hedrich R., Limami A.M., Rentsch D., Seo M., Tsay Y.F., Zhang M.,
RA   Coruzzi G., Lacombe B.;
RT   "A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family
RT   members in plants.";
RL   Trends Plant Sci. 19:5-9(2014).
CC   -!- FUNCTION: Transporter involved in a passive nitrate efflux.
CC       {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Multi-pass membrane
CC       protein {ECO:0000250}.
CC   -!- TISSUE SPECIFICITY: Not detected. {ECO:0000269|PubMed:17481610}.
CC   -!- SIMILARITY: Belongs to the major facilitator superfamily. Proton-
CC       dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
CC       {ECO:0000305}.
CC   -!- CAUTION: Could be the product of a pseudogene. {ECO:0000305}.
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DR   EMBL; AL157735; CAB75782.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE78060.1; -; Genomic_DNA.
DR   PIR; T47509; T47509.
DR   RefSeq; NP_190155.1; NM_114438.1.
DR   AlphaFoldDB; Q9M174; -.
DR   SMR; Q9M174; -.
DR   STRING; 3702.AT3G45690.1; -.
DR   PaxDb; Q9M174; -.
DR   PRIDE; Q9M174; -.
DR   EnsemblPlants; AT3G45690.1; AT3G45690.1; AT3G45690.
DR   GeneID; 823711; -.
DR   Gramene; AT3G45690.1; AT3G45690.1; AT3G45690.
DR   KEGG; ath:AT3G45690; -.
DR   Araport; AT3G45690; -.
DR   TAIR; locus:2102669; AT3G45690.
DR   eggNOG; KOG1237; Eukaryota.
DR   HOGENOM; CLU_009313_4_2_1; -.
DR   InParanoid; Q9M174; -.
DR   OMA; FLVCAWF; -.
DR   OrthoDB; 365203at2759; -.
DR   PhylomeDB; Q9M174; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q9M174; baseline and differential.
DR   Genevisible; Q9M174; AT.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0042128; P:nitrate assimilation; IEA:UniProtKB-KW.
DR   GO; GO:0006857; P:oligopeptide transport; IEA:InterPro.
DR   Gene3D; 1.20.1250.20; -; 1.
DR   InterPro; IPR036259; MFS_trans_sf.
DR   InterPro; IPR000109; POT_fam.
DR   InterPro; IPR018456; PTR2_symporter_CS.
DR   PANTHER; PTHR11654; PTHR11654; 2.
DR   Pfam; PF00854; PTR2; 1.
DR   SUPFAM; SSF103473; SSF103473; 1.
DR   PROSITE; PS01022; PTR2_1; 1.
PE   5: Uncertain;
KW   Membrane; Nitrate assimilation; Reference proteome; Transmembrane;
KW   Transmembrane helix; Transport.
FT   CHAIN           1..516
FT                   /note="Putative protein NRT1/ PTR FAMILY 2.2"
FT                   /id="PRO_0000399974"
FT   TRANSMEM        31..51
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        67..87
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        90..110
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        138..158
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        174..194
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        201..221
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        320..340
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        362..382
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        394..414
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        437..457
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        476..496
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   516 AA;  57111 MW;  7F27CD9C19A68269 CRC64;
     MARSVDTEAM TTRDPSSKRG GWKTFPFMIA TLLGLSIASF GWVMNLVVFL IKEFNIKSIA
     ATQNSNIVNG CVSMLPVVAA ILADSFFGNI PVISVSAFIS LLGIILLTMI TSLDHLRPPP
     CETGSILCES PSKLQLGILY IALALVIIGS AGTRFTLASA GANQYEKPKE QGSFFNWYFL
     TLYTGAITGA TAIVYTQENA SWKLGFGLCA VANLISFIVF VSGKRYYKHD KPMGSPFTNL
     IRVVVAATRK RKAVISSREE DYHHGLGREG KTSSAMPSKS FRFFNRAALK TEDDSVNNNW
     RLCSVQEVED FKAVFRVLPL LLAIIFVSTP MVTQTSLIIL QALVTDRGLG PHFKIPAGSL
     QVIVIITACI VILMNNCLVY PMYQKLAHKP LTPLQKVGIG HVFIILSMAI SAIVEAKRLK
     TVTNGHSMSV LWLHRDFIAS VVIGISFYLS TALITLIQKT TKWLPNDINH GRVDNVYWLL
     VIVGVLNYFL VCAWFYRYRN LNDDDDQEQD PKDDTT
 
 
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