PTR54_ARATH
ID PTR54_ARATH Reviewed; 589 AA.
AC Q9FM20;
DT 02-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 02-NOV-2010, sequence version 2.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Protein NRT1/ PTR FAMILY 4.7;
DE Short=AtNPF4.7;
GN Name=NPF4.7; OrderedLocusNames=At5g62730; ORFNames=MQB2.30;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP TISSUE SPECIFICITY, AND GENE FAMILY.
RX PubMed=17481610; DOI=10.1016/j.febslet.2007.04.047;
RA Tsay Y.F., Chiu C.C., Tsai C.B., Ho C.H., Hsu P.K.;
RT "Nitrate transporters and peptide transporters.";
RL FEBS Lett. 581:2290-2300(2007).
RN [4]
RP GENE FAMILY.
RX PubMed=20501909; DOI=10.1105/tpc.110.075242;
RA Li J.Y., Fu Y.L., Pike S.M., Bao J., Tian W., Zhang Y., Chen C.Z.,
RA Zhang Y., Li H.M., Huang J., Li L.G., Schroeder J.I., Gassmann W.,
RA Gong J.M.;
RT "The Arabidopsis nitrate transporter NRT1.8 functions in nitrate removal
RT from the xylem sap and mediates cadmium tolerance.";
RL Plant Cell 22:1633-1646(2010).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24055139; DOI=10.1016/j.tplants.2013.08.008;
RA Leran S., Varala K., Boyer J.C., Chiurazzi M., Crawford N.,
RA Daniel-Vedele F., David L., Dickstein R., Fernandez E., Forde B.,
RA Gassmann W., Geiger D., Gojon A., Gong J.M., Halkier B.A., Harris J.M.,
RA Hedrich R., Limami A.M., Rentsch D., Seo M., Tsay Y.F., Zhang M.,
RA Coruzzi G., Lacombe B.;
RT "A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family
RT members in plants.";
RL Trends Plant Sci. 19:5-9(2014).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in flowers.
CC {ECO:0000269|PubMed:17481610}.
CC -!- SIMILARITY: Belongs to the major facilitator superfamily. Proton-
CC dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10842.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB009053; BAB10842.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED97648.1; -; Genomic_DNA.
DR RefSeq; NP_201079.1; NM_125668.2.
DR AlphaFoldDB; Q9FM20; -.
DR SMR; Q9FM20; -.
DR STRING; 3702.AT5G62730.1; -.
DR PaxDb; Q9FM20; -.
DR PRIDE; Q9FM20; -.
DR ProteomicsDB; 226429; -.
DR EnsemblPlants; AT5G62730.1; AT5G62730.1; AT5G62730.
DR GeneID; 836394; -.
DR Gramene; AT5G62730.1; AT5G62730.1; AT5G62730.
DR KEGG; ath:AT5G62730; -.
DR Araport; AT5G62730; -.
DR TAIR; locus:2170683; AT5G62730.
DR eggNOG; KOG1237; Eukaryota.
DR HOGENOM; CLU_009313_4_0_1; -.
DR InParanoid; Q9FM20; -.
DR OrthoDB; 365203at2759; -.
DR PhylomeDB; Q9FM20; -.
DR PRO; PR:Q9FM20; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FM20; baseline and differential.
DR Genevisible; Q9FM20; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR Gene3D; 1.20.1250.20; -; 1.
DR InterPro; IPR036259; MFS_trans_sf.
DR InterPro; IPR000109; POT_fam.
DR PANTHER; PTHR11654; PTHR11654; 1.
DR Pfam; PF00854; PTR2; 1.
DR SUPFAM; SSF103473; SSF103473; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..589
FT /note="Protein NRT1/ PTR FAMILY 4.7"
FT /id="PRO_0000399988"
FT TRANSMEM 59..79
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 105..125
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 127..147
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 160..180
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 201..221
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 230..250
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 344..364
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 383..403
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 429..449
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 471..491
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 520..540
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 560..580
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 589 AA; 65243 MW; A5D5152A2F7FA91D CRC64;
MSTNYTAINH ILHFHSPNSC FLMIMSLEFE QMDEANRLSA WNGYVDWRSR PALRGRHGGM
LAASFVLVVE VLENLAFLAN ASNLVLYLST KMGFSPSGAA NAVTAFMGTA FFLALLGGFL
ADAFFTTFHI YLVSAAIEFL GLMVLTVQAH EHSTEPWSRV FLFVGLYLVA LGVGGIKGSL
PPHGAEQFDE ETSSGRRQRS FFFNYFIFSL SCGALIAVTV VVWLEDNKGW SYGFGVSTAA
ILISVPVFLA GSRVYRLKVP SGSPITTLFK VLTAALYAKY KKRRTSRIVV TCHTRNDCDD
SVTKQNCDGD DGFLGSFLGE VVRERESLPR PLRCTEEQVK DVKIVIKILP IFMSTIMLNC
CLAQLSTFSV QQASTMNTKL GSFTVPPAAL PVFPVVFMMI LAPTYNHLLL PLARKSTKTE
TGITHLQRIG TGLVLSIVAM AVAALVETKR KHVVVSCCSN NNSSSYSSSP LPITFLWVAI
QYVFLGSADL FTLAGMMEFF FTEAPSTMRS LATSLSWASL AMGYYFSSVL VSAVNFVTGL
NHHNPWLLGE NLNQYHLERF YWLMCVLSGI NFLHYLFWAS RYVYRSNQG
