PUMP5_ARATH
ID PUMP5_ARATH Reviewed; 313 AA.
AC Q9SJY5; Q0WL82; Q94K32;
DT 28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 142.
DE RecName: Full=Mitochondrial uncoupling protein 5;
DE Short=AtPUMP5;
DE AltName: Full=Mitochondrial dicarboxylate carrier 1;
GN Name=PUMP5; Synonyms=DIC1, UCP5; OrderedLocusNames=At2g22500;
GN ORFNames=F14M13.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia; TISSUE=Root;
RX PubMed=18039180; DOI=10.1042/bj20070867;
RA Palmieri L., Picault N., Arrigoni R., Besin E., Palmieri F., Hodges M.;
RT "Molecular identification of three Arabidopsis thaliana mitochondrial
RT dicarboxylate carrier isoforms: organ distribution, bacterial expression,
RT reconstitution into liposomes and functional characterization.";
RL Biochem. J. 410:621-629(2008).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP FUNCTION, TISSUE SPECIFICITY, INDUCTION BY COLD, GENE FAMILY, AND
RP NOMENCLATURE.
RX PubMed=16473895; DOI=10.1093/jxb/erj070;
RA Borecky J., Nogueira F.T., de Oliveira K.A., Maia I.G., Vercesi A.E.,
RA Arruda P.;
RT "The plant energy-dissipating mitochondrial systems: depicting the genomic
RT structure and the expression profiles of the gene families of uncoupling
RT protein and alternative oxidase in monocots and dicots.";
RL J. Exp. Bot. 57:849-864(2006).
RN [7]
RP INDUCTION BY HIGH LIGHT.
RX PubMed=19567377; DOI=10.1093/pcp/pcp090;
RA Yoshida K., Noguchi K.;
RT "Differential gene expression profiles of the mitochondrial respiratory
RT components in illuminated Arabidopsis leaves.";
RL Plant Cell Physiol. 50:1449-1462(2009).
CC -!- FUNCTION: PUMPS are mitochondrial transporter proteins that create
CC proton leaks across the inner mitochondrial membrane, thus uncoupling
CC oxidative phosphorylation. This leads to a decrease in the efficiency
CC of oxidative phosphorylation and an increase in heat production. May be
CC involved in protecting plant cells against oxidative stress damage.
CC Recombinant PUMP5, reconstituted into liposomes, transports a wide
CC range of dicarboxylic acids including malate, oxaloacetate and
CC succinate as well as phosphate, sulfate and thiosulfate. However, it is
CC unknown if these transports are of any biological significance in vivo.
CC {ECO:0000269|PubMed:16473895, ECO:0000269|PubMed:18039180}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane {ECO:0000250};
CC Multi-pass membrane protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, leaves, stems and flowers.
CC {ECO:0000269|PubMed:16473895, ECO:0000269|PubMed:18039180}.
CC -!- INDUCTION: By cold stress and high light. {ECO:0000269|PubMed:16473895,
CC ECO:0000269|PubMed:19567377}.
CC -!- SIMILARITY: Belongs to the mitochondrial carrier (TC 2.A.29) family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF02125.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AM236862; CAJ86454.1; -; mRNA.
DR EMBL; AC006592; AAD22351.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07315.1; -; Genomic_DNA.
DR EMBL; AF370340; AAK44155.1; -; mRNA.
DR EMBL; AF370588; AAK43907.1; -; mRNA.
DR EMBL; AY142648; AAN13106.1; -; mRNA.
DR EMBL; AK230325; BAF02125.1; ALT_FRAME; mRNA.
DR PIR; D84613; D84613.
DR RefSeq; NP_179836.1; NM_127816.3.
DR AlphaFoldDB; Q9SJY5; -.
DR STRING; 3702.AT2G22500.1; -.
DR TCDB; 2.A.29.2.9; the mitochondrial carrier (mc) family.
DR PaxDb; Q9SJY5; -.
DR PRIDE; Q9SJY5; -.
DR ProteomicsDB; 226268; -.
DR EnsemblPlants; AT2G22500.1; AT2G22500.1; AT2G22500.
DR GeneID; 816783; -.
DR Gramene; AT2G22500.1; AT2G22500.1; AT2G22500.
DR KEGG; ath:AT2G22500; -.
DR Araport; AT2G22500; -.
DR TAIR; locus:2041183; AT2G22500.
DR eggNOG; KOG0759; Eukaryota.
DR HOGENOM; CLU_015166_14_1_1; -.
DR InParanoid; Q9SJY5; -.
DR OMA; MMDTSTM; -.
DR OrthoDB; 892773at2759; -.
DR PhylomeDB; Q9SJY5; -.
DR PRO; PR:Q9SJY5; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SJY5; baseline and differential.
DR Genevisible; Q9SJY5; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015297; F:antiporter activity; IBA:GO_Central.
DR GO; GO:0005310; F:dicarboxylic acid transmembrane transporter activity; IDA:TAIR.
DR GO; GO:0015140; F:malate transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0015131; F:oxaloacetate transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0017077; F:oxidative phosphorylation uncoupler activity; IDA:UniProtKB.
DR GO; GO:0015141; F:succinate transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0015116; F:sulfate transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0015117; F:thiosulfate transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0022857; F:transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0071456; P:cellular response to hypoxia; HEP:TAIR.
DR GO; GO:0071423; P:malate transmembrane transport; IBA:GO_Central.
DR GO; GO:0006839; P:mitochondrial transport; IDA:TAIR.
DR GO; GO:0015729; P:oxaloacetate transport; IBA:GO_Central.
DR GO; GO:0035435; P:phosphate ion transmembrane transport; IBA:GO_Central.
DR GO; GO:1902600; P:proton transmembrane transport; IDA:UniProtKB.
DR GO; GO:0071422; P:succinate transmembrane transport; IBA:GO_Central.
DR GO; GO:0008272; P:sulfate transport; IBA:GO_Central.
DR GO; GO:0015709; P:thiosulfate transport; IBA:GO_Central.
DR Gene3D; 1.50.40.10; -; 1.
DR InterPro; IPR002030; Mit_uncoupling_UCP-like.
DR InterPro; IPR018108; Mitochondrial_sb/sol_carrier.
DR InterPro; IPR023395; Mt_carrier_dom_sf.
DR Pfam; PF00153; Mito_carr; 3.
DR PRINTS; PR00784; MTUNCOUPLING.
DR SUPFAM; SSF103506; SSF103506; 1.
DR PROSITE; PS50920; SOLCAR; 3.
PE 2: Evidence at transcript level;
KW Membrane; Mitochondrion; Mitochondrion inner membrane; Reference proteome;
KW Repeat; Stress response; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..313
FT /note="Mitochondrial uncoupling protein 5"
FT /id="PRO_0000420259"
FT TRANSMEM 6..26
FT /note="Helical; Name=1"
FT /evidence="ECO:0000255"
FT TRANSMEM 77..97
FT /note="Helical; Name=2"
FT /evidence="ECO:0000255"
FT TRANSMEM 123..143
FT /note="Helical; Name=3"
FT /evidence="ECO:0000255"
FT TRANSMEM 182..202
FT /note="Helical; Name=4"
FT /evidence="ECO:0000255"
FT TRANSMEM 223..243
FT /note="Helical; Name=5"
FT /evidence="ECO:0000255"
FT TRANSMEM 280..300
FT /note="Helical; Name=6"
FT /evidence="ECO:0000255"
FT REPEAT 4..108
FT /note="Solcar 1"
FT REPEAT 117..208
FT /note="Solcar 2"
FT REPEAT 217..307
FT /note="Solcar 3"
FT CONFLICT 130
FT /note="G -> V (in Ref. 4; AAK44155)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 313 AA; 33357 MW; 447903EAA3865E6C CRC64;
MGLKGFAEGG IASIVAGCST HPLDLIKVRM QLQGESAPIQ TNLRPALAFQ TSTTVNAPPL
RVGVIGVGSR LIREEGMRAL FSGVSATVLR QTLYSTTRMG LYDIIKGEWT DPETKTMPLM
KKIGAGAIAG AIGAAVGNPA DVAMVRMQAD GRLPLTDRRN YKSVLDAITQ MIRGEGVTSL
WRGSSLTINR AMLVTSSQLA SYDSVKETIL EKGLLKDGLG THVSASFAAG FVASVASNPV
DVIKTRVMNM KVVAGVAPPY KGAVDCALKT VKAEGIMSLY KGFIPTVSRQ APFTVVLFVT
LEQVKKLFKD YDF
