PUX10_ARATH
ID PUX10_ARATH Reviewed; 480 AA.
AC Q9M0N1; O82483; Q67XY6;
DT 01-APR-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 121.
DE RecName: Full=Plant UBX domain-containing protein 10 {ECO:0000303|Ref.4};
DE Short=PUX10 {ECO:0000303|Ref.4};
GN Name=PUX10 {ECO:0000303|Ref.4};
GN OrderedLocusNames=At4g10790 {ECO:0000312|Araport:AT4G10790};
GN ORFNames=T12H20.9 {ECO:0000312|EMBL:AAC35520.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 185-480.
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RA Posthuma R., Rancour D., Park S., Bates B., Bednarek S.;
RT "The plant UBX-domain containing (PUX) protein family regulates the
RT function of Arabidopsis CDC48, a conserved essential AAA-ATPase.";
RL (In) Proceedings of the 16th international conference on Arabidopsis
RL research, abstract#116, Madison (2005).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC35520.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF080119; AAC35520.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161518; CAB81180.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE82929.1; -; Genomic_DNA.
DR EMBL; AK176682; BAD44445.1; -; mRNA.
DR PIR; H85112; H85112.
DR PIR; T01898; T01898.
DR RefSeq; NP_192817.1; NM_117147.4.
DR AlphaFoldDB; Q9M0N1; -.
DR SMR; Q9M0N1; -.
DR STRING; 3702.AT4G10790.1; -.
DR TCDB; 3.A.16.1.5; the endoplasmic reticular retrotranslocon (er-rt) family.
DR PaxDb; Q9M0N1; -.
DR PRIDE; Q9M0N1; -.
DR ProteomicsDB; 224799; -.
DR EnsemblPlants; AT4G10790.1; AT4G10790.1; AT4G10790.
DR GeneID; 826675; -.
DR Gramene; AT4G10790.1; AT4G10790.1; AT4G10790.
DR KEGG; ath:AT4G10790; -.
DR Araport; AT4G10790; -.
DR TAIR; locus:2132751; AT4G10790.
DR eggNOG; KOG1363; Eukaryota.
DR HOGENOM; CLU_047924_2_0_1; -.
DR InParanoid; Q9M0N1; -.
DR OMA; HTLFWAC; -.
DR OrthoDB; 1251507at2759; -.
DR PhylomeDB; Q9M0N1; -.
DR PRO; PR:Q9M0N1; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9M0N1; baseline and differential.
DR Genevisible; Q9M0N1; AT.
DR GO; GO:0009941; C:chloroplast envelope; IDA:TAIR.
DR GO; GO:0005783; C:endoplasmic reticulum; IDA:TAIR.
DR GO; GO:0005811; C:lipid droplet; IDA:TAIR.
DR GO; GO:0005886; C:plasma membrane; HDA:TAIR.
DR GO; GO:0030674; F:protein-macromolecule adaptor activity; IDA:TAIR.
DR GO; GO:0043130; F:ubiquitin binding; IDA:TAIR.
DR GO; GO:1905691; P:lipid droplet disassembly; IMP:TAIR.
DR GO; GO:0030433; P:ubiquitin-dependent ERAD pathway; IBA:GO_Central.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR006577; UAS.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR001012; UBX_dom.
DR Pfam; PF00789; UBX; 1.
DR SMART; SM00594; UAS; 1.
DR SMART; SM00166; UBX; 1.
DR SUPFAM; SSF52833; SSF52833; 1.
DR SUPFAM; SSF54236; SSF54236; 1.
DR PROSITE; PS50033; UBX; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome; Ubl conjugation pathway.
FT CHAIN 1..480
FT /note="Plant UBX domain-containing protein 10"
FT /id="PRO_0000432608"
FT DOMAIN 399..477
FT /note="UBX"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00215"
FT REGION 47..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 335..383
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 330..389
FT /evidence="ECO:0000255"
FT COMPBIAS 336..383
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 480 AA; 52803 MW; 07743BD0673F167E CRC64;
MVDTVDKLGY FQAITGLEDA DLCTEILQAH GWDLELAISS FTSSDQDASS SAVDGGGNNR
DHDHNNATVT PDYPPRGIVD DTELVMRDDG GGNRGPGVAW RIITLPISIV SGSLGLVSGA
IGLGIWAAGG VLSYSLGMLG FRSGRGGGSE SARLVSVSSA VGEAMEFVAL FDRDYGSNNA
FKIDFVVEGF MDALQRSRSS FKLLFVYLHS PDHPDTPVFC GGTLCNEAVV AFVNENFVSW
GGSIRSSEGF KMSNSLKASR FPFCAVVMPA ANQRIALLQQ VEGPKSPEEM LAILQRIVED
SSPTLVTARV EAEERRTNLR LREEQDAAYR AALEADQARE QQRQEEKERL EREAAEAERK
LKEEEEARER AAREAEERQA ARVRMRQEKA LALGEEPEKG PDVTQVLVRF PNGERKGRMF
KSETKIQTLY DYVDSLGLLD TEEYSLITNF PRTVYGRDKE SMSLKDAGLH PQASLFIEIN
