PUX12_ARATH
ID PUX12_ARATH Reviewed; 152 AA.
AC Q9LUG7; Q8L9E1;
DT 01-APR-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Plant UBX domain-containing protein 12 {ECO:0000303|Ref.6};
DE Short=PUX12 {ECO:0000303|Ref.6};
GN Name=PUX12 {ECO:0000303|Ref.6};
GN OrderedLocusNames=At3g23605 {ECO:0000312|Araport:AT3G23605};
GN ORFNames=MDB19.9 {ECO:0000312|EMBL:BAB02779.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP GENE FAMILY.
RA Posthuma R., Rancour D., Park S., Bates B., Bednarek S.;
RT "The plant UBX-domain containing (PUX) protein family regulates the
RT function of Arabidopsis CDC48, a conserved essential AAA-ATPase.";
RL (In) Proceedings of the 16th international conference on Arabidopsis
RL research, abstract#116, Madison (2005).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAM66019.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB023036; BAB02779.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76783.1; -; Genomic_DNA.
DR EMBL; AK221143; BAD95135.1; -; mRNA.
DR EMBL; BT025611; ABF59029.1; -; mRNA.
DR EMBL; AY088483; AAM66019.1; ALT_INIT; mRNA.
DR RefSeq; NP_566733.1; NM_113264.4.
DR AlphaFoldDB; Q9LUG7; -.
DR SMR; Q9LUG7; -.
DR STRING; 3702.AT3G23605.1; -.
DR TCDB; 3.A.16.1.5; the endoplasmic reticular retrotranslocon (er-rt) family.
DR PaxDb; Q9LUG7; -.
DR PRIDE; Q9LUG7; -.
DR ProteomicsDB; 224817; -.
DR EnsemblPlants; AT3G23605.1; AT3G23605.1; AT3G23605.
DR GeneID; 821940; -.
DR Gramene; AT3G23605.1; AT3G23605.1; AT3G23605.
DR KEGG; ath:AT3G23605; -.
DR Araport; AT3G23605; -.
DR TAIR; locus:505006365; AT3G23605.
DR eggNOG; KOG1364; Eukaryota.
DR HOGENOM; CLU_1724805_0_0_1; -.
DR InParanoid; Q9LUG7; -.
DR OMA; YFGSNTT; -.
DR OrthoDB; 1130151at2759; -.
DR PhylomeDB; Q9LUG7; -.
DR PRO; PR:Q9LUG7; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LUG7; baseline and differential.
DR Genevisible; Q9LUG7; AT.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0043130; F:ubiquitin binding; IBA:GO_Central.
DR GO; GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR001012; UBX_dom.
DR Pfam; PF00789; UBX; 1.
DR SUPFAM; SSF54236; SSF54236; 1.
DR PROSITE; PS50033; UBX; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ubl conjugation pathway.
FT CHAIN 1..152
FT /note="Plant UBX domain-containing protein 12"
FT /id="PRO_0000432610"
FT DOMAIN 67..150
FT /note="UBX"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00215"
FT REGION 32..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 17
FT /note="V -> I (in Ref. 5; AAM66019)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 152 AA; 17593 MW; E06B46A2F38F5547 CRC64;
MLECQSMMEK LSPFVDVASL EIESLRRIKR PKRFSEEESE ETENTTNSSN AVFGFPNLPE
EPNRDMDQSV LCRICVRLPD GRRIQRSFLK SESVQLLWSF CYSQIGDESS ERKRRFKLIQ
GFPGDYKNLY FGSNTTFEQS GLANSLVSVT WL
