PX112_ORYSJ
ID PX112_ORYSJ Reviewed; 254 AA.
AC Q10MN3; C7J0P2;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=Peroxisomal membrane protein 11-2;
DE AltName: Full=OsPEX11-2;
DE AltName: Full=OsPEX11-5;
DE AltName: Full=Peroxin-11-2;
GN Name=PEX11-2; OrderedLocusNames=Os03g0301950, LOC_Os03g19000;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP DEVELOPMENTAL STAGE, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18291602; DOI=10.1016/j.gene.2008.01.006;
RA Nayidu N.K., Wang L., Xie W., Zhang C., Fan C., Lian X., Zhang Q.,
RA Xiong L.;
RT "Comprehensive sequence and expression profile analysis of PEX11 gene
RT family in rice.";
RL Gene 412:59-70(2008).
CC -!- FUNCTION: Involved in peroxisomal proliferation. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Peroxisome membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- DEVELOPMENTAL STAGE: Expressed in endosperm 14 and 21 days after
CC pollination. {ECO:0000269|PubMed:18291602}.
CC -!- SIMILARITY: Belongs to the peroxin-11 family. {ECO:0000305}.
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DR EMBL; DP000009; ABF95492.1; -; Genomic_DNA.
DR EMBL; AP008209; BAH92115.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS83778.1; -; Genomic_DNA.
DR RefSeq; XP_015630854.1; XM_015775368.1.
DR AlphaFoldDB; Q10MN3; -.
DR STRING; 4530.OS03T0301950-00; -.
DR PaxDb; Q10MN3; -.
DR PRIDE; Q10MN3; -.
DR EnsemblPlants; Os03t0301950-01; Os03t0301950-01; Os03g0301950.
DR GeneID; 9267541; -.
DR Gramene; Os03t0301950-01; Os03t0301950-01; Os03g0301950.
DR KEGG; osa:9267541; -.
DR eggNOG; KOG4186; Eukaryota.
DR HOGENOM; CLU_080291_0_0_1; -.
DR InParanoid; Q10MN3; -.
DR OMA; WAQLLAH; -.
DR OrthoDB; 1394894at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR Genevisible; Q10MN3; OS.
DR GO; GO:0005779; C:integral component of peroxisomal membrane; IEA:InterPro.
DR GO; GO:0005778; C:peroxisomal membrane; IBA:GO_Central.
DR GO; GO:0042802; F:identical protein binding; IEA:UniProt.
DR GO; GO:0016559; P:peroxisome fission; IBA:GO_Central.
DR GO; GO:0044375; P:regulation of peroxisome size; IBA:GO_Central.
DR InterPro; IPR008733; PEX11.
DR Pfam; PF05648; PEX11; 1.
PE 2: Evidence at transcript level;
KW Membrane; Peroxisome; Peroxisome biogenesis; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..254
FT /note="Peroxisomal membrane protein 11-2"
FT /id="PRO_0000330301"
FT TOPO_DOM 1..113
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 114..134
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 135..227
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 228..247
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 248..254
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 254 AA; 27364 MW; 6A971D9DCE032B1F CRC64;
MVTAAGSPSS SSARKPASRP RLPCRDILVH IEAYLSRRDG VDNLLKVSLY AARLALALAA
GQPPLPHAAT ARLRSFESSV GLSRKAFRLG KFVQSINALR AAAYHPHPHV HPLLVLLAYG
GQGVYNFLEQ FAWLAKAGLL PARLLPRRLH RIGVWAQLLA HVGSIAIKLE EVAELECGVE
ARLEEGCGEE SEVVRTLSRK LLLKLMSLVQ DMVDSAMTVG DVTGRKGLLG SSTLMASAGL
LSALISVHKN WNSC
