PX115_ORYSJ
ID PX115_ORYSJ Reviewed; 233 AA.
AC Q5VRJ8; Q0DEZ9;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Peroxisomal membrane protein 11-5;
DE AltName: Full=OsPEX11-2;
DE AltName: Full=OsPEX11-5;
DE AltName: Full=Peroxin-11-5;
GN Name=PEX11-5; OrderedLocusNames=Os06g0127000, LOC_Os06g03660;
GN ORFNames=OSJNBa0038F22.10-1, P0425F02.44-1;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [5]
RP TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18291602; DOI=10.1016/j.gene.2008.01.006;
RA Nayidu N.K., Wang L., Xie W., Zhang C., Fan C., Lian X., Zhang Q.,
RA Xiong L.;
RT "Comprehensive sequence and expression profile analysis of PEX11 gene
RT family in rice.";
RL Gene 412:59-70(2008).
CC -!- FUNCTION: Involved in peroxisomal proliferation. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Peroxisome membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaf
CC sheaths, flag leaf, panicles, spikelets, and endosperm.
CC {ECO:0000269|PubMed:18291602}.
CC -!- DEVELOPMENTAL STAGE: Expressed in endosperm 21 days after pollination.
CC -!- INDUCTION: By abscisic acid, H(2)O(2) and salt stress. Down-regulated
CC by nitrogen or phosphorous deprivation.
CC -!- SIMILARITY: Belongs to the peroxin-11 family. {ECO:0000305}.
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DR EMBL; AP001168; BAD67743.1; -; Genomic_DNA.
DR EMBL; AP002838; BAD67925.1; -; Genomic_DNA.
DR EMBL; AP008212; BAF18574.2; -; Genomic_DNA.
DR EMBL; AP014962; BAS95930.1; -; Genomic_DNA.
DR EMBL; AK061048; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015640928.1; XM_015785442.1.
DR AlphaFoldDB; Q5VRJ8; -.
DR STRING; 4530.OS06T0127000-02; -.
DR PaxDb; Q5VRJ8; -.
DR PRIDE; Q5VRJ8; -.
DR EnsemblPlants; Os06t0127000-01; Os06t0127000-01; Os06g0127000.
DR EnsemblPlants; Os06t0127000-02; Os06t0127000-02; Os06g0127000.
DR EnsemblPlants; Os06t0127000-03; Os06t0127000-03; Os06g0127000.
DR GeneID; 4339973; -.
DR Gramene; Os06t0127000-01; Os06t0127000-01; Os06g0127000.
DR Gramene; Os06t0127000-02; Os06t0127000-02; Os06g0127000.
DR Gramene; Os06t0127000-03; Os06t0127000-03; Os06g0127000.
DR KEGG; osa:4339973; -.
DR eggNOG; KOG4186; Eukaryota.
DR HOGENOM; CLU_075417_0_0_1; -.
DR InParanoid; Q5VRJ8; -.
DR OMA; YFGADHV; -.
DR OrthoDB; 1394894at2759; -.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR ExpressionAtlas; Q5VRJ8; baseline and differential.
DR Genevisible; Q5VRJ8; OS.
DR GO; GO:0005779; C:integral component of peroxisomal membrane; IEA:InterPro.
DR GO; GO:0005778; C:peroxisomal membrane; IBA:GO_Central.
DR GO; GO:0042802; F:identical protein binding; IEA:UniProt.
DR GO; GO:0016559; P:peroxisome fission; IBA:GO_Central.
DR GO; GO:0044375; P:regulation of peroxisome size; IBA:GO_Central.
DR InterPro; IPR008733; PEX11.
DR Pfam; PF05648; PEX11; 1.
PE 2: Evidence at transcript level;
KW Membrane; Peroxisome; Peroxisome biogenesis; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..233
FT /note="Peroxisomal membrane protein 11-5"
FT /id="PRO_0000330306"
FT TOPO_DOM 1..92
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 93..113
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 114..206
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 207..226
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 233 AA; 25889 MW; 2F6616C24F8235DA CRC64;
MSSLESARAD LALLILYLNK AEARDKICRA IQYGSKFVSN GQPGPAQNVD KSTSLARKVF
RLFKFVNDLH ALISPPAKGT PLPLILLGKS KNALLSTFLF LDQIVWAGRT GIYKNKERAE
FLSKIAFYCF LGSNTCTSII EVAELQRLSK SMKKLEKELK HQELLKNEQY QMKLQKCNER
RLALIKSSLD IVVAIGLLQL APKKVTPRVT GAFGFASSLI ACYQLLPAPA KSK
