PYR1_THEVB
ID PYR1_THEVB Reviewed; 287 AA.
AC P50034;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod;
GN Name=cpcC; OrderedLocusNames=tlr1959;
OS Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1).
OC Bacteria; Cyanobacteria; Pseudanabaenales; Thermosynechococcaceae;
OC Thermosynechococcus.
OX NCBI_TaxID=197221;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Shimazu T., Soga M., Hirano M., Katoh S.;
RT "Cloning and sequencing of the phycocyanin operon from the thermophilic
RT cyanobacterium Synechococcus elongatus.";
RL Submitted (SEP-1992) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NIES-2133 / IAM M-273 / BP-1;
RX PubMed=12240834; DOI=10.1093/dnares/9.4.123;
RA Nakamura Y., Kaneko T., Sato S., Ikeuchi M., Katoh H., Sasamoto S.,
RA Watanabe A., Iriguchi M., Kawashima K., Kimura T., Kishida Y., Kiyokawa C.,
RA Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Sugimoto M.,
RA Takeuchi C., Yamada M., Tabata S.;
RT "Complete genome structure of the thermophilic cyanobacterium
RT Thermosynechococcus elongatus BP-1.";
RL DNA Res. 9:123-130(2002).
CC -!- FUNCTION: Rod linker protein, associated with phycocyanin. Linker
CC polypeptides determine the state of aggregation and the location of the
CC disk-shaped phycobiliprotein units within the phycobilisome and
CC modulate their spectroscopic properties in order to mediate a directed
CC and optimal energy transfer.
CC -!- SUBCELLULAR LOCATION: Cellular thylakoid membrane {ECO:0000250};
CC Peripheral membrane protein {ECO:0000250}; Cytoplasmic side
CC {ECO:0000250}. Note=This protein occurs in the rod, it is associated
CC with phycocyanin. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the phycobilisome linker protein family.
CC {ECO:0000255|PROSITE-ProRule:PRU00775}.
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DR EMBL; D13173; BAA02457.1; -; Genomic_DNA.
DR EMBL; BA000039; BAC09511.1; -; Genomic_DNA.
DR RefSeq; NP_682749.1; NC_004113.1.
DR RefSeq; WP_011057794.1; NC_004113.1.
DR PDB; 2L8V; NMR; -; A=20-153.
DR PDBsum; 2L8V; -.
DR AlphaFoldDB; P50034; -.
DR SMR; P50034; -.
DR STRING; 197221.22295685; -.
DR EnsemblBacteria; BAC09511; BAC09511; BAC09511.
DR KEGG; tel:tlr1959; -.
DR PATRIC; fig|197221.4.peg.2049; -.
DR eggNOG; COG0237; Bacteria.
DR OMA; YNSFQTR; -.
DR OrthoDB; 920849at2; -.
DR Proteomes; UP000000440; Chromosome.
DR GO; GO:0030089; C:phycobilisome; IEA:UniProtKB-KW.
DR GO; GO:0031676; C:plasma membrane-derived thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3130.20; -; 1.
DR InterPro; IPR008213; CpcD-like_dom.
DR InterPro; IPR001297; PBS_linker_dom.
DR InterPro; IPR038255; PBS_linker_sf.
DR InterPro; IPR016470; Phycobilisome.
DR Pfam; PF01383; CpcD; 1.
DR Pfam; PF00427; PBS_linker_poly; 1.
DR PIRSF; PIRSF005898; Phycobilisome_CpeC/CpcI; 1.
DR SMART; SM01094; CpcD; 1.
DR PROSITE; PS51441; CPCD_LIKE; 1.
DR PROSITE; PS51445; PBS_LINKER; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Antenna complex; Membrane; Photosynthesis; Phycobilisome;
KW Reference proteome; Thylakoid.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..287
FT /note="Phycobilisome 32.1 kDa linker polypeptide,
FT phycocyanin-associated, rod"
FT /id="PRO_0000199221"
FT DOMAIN 2..180
FT /note="PBS-linker"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00775"
FT DOMAIN 235..287
FT /note="CpcD-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00771"
FT HELIX 29..39
FT /evidence="ECO:0007829|PDB:2L8V"
FT STRAND 48..52
FT /evidence="ECO:0007829|PDB:2L8V"
FT HELIX 56..63
FT /evidence="ECO:0007829|PDB:2L8V"
FT HELIX 69..77
FT /evidence="ECO:0007829|PDB:2L8V"
FT TURN 86..88
FT /evidence="ECO:0007829|PDB:2L8V"
FT HELIX 92..103
FT /evidence="ECO:0007829|PDB:2L8V"
FT STRAND 104..106
FT /evidence="ECO:0007829|PDB:2L8V"
FT HELIX 111..123
FT /evidence="ECO:0007829|PDB:2L8V"
FT HELIX 126..135
FT /evidence="ECO:0007829|PDB:2L8V"
FT HELIX 137..143
FT /evidence="ECO:0007829|PDB:2L8V"
FT STRAND 145..148
FT /evidence="ECO:0007829|PDB:2L8V"
SQ SEQUENCE 287 AA; 32124 MW; 9ED5E81ECB7FD68A CRC64;
MAITAAASRL GTSAFSDAPP VELRANWSEE DLETVIRAVY RQVLGNDYVM ASERLVSAES
LLRNGKITVR EFVRAVAKSE LYKEKFLYGN FQTRVIELNY KHLLGRAPYD ESEVIFHLDL
YENEGFDADI DSYIDSPEYT NSFGDWVVPY YRGFNTQPGQ KTVGFNRIFR LYRGYANSDR
AQAEGSMSRL ARDLATNRAN TVVPPSNSDT AFAYYTPSAD VPPRACLGGS FGESGRVYRI
EVAGIRQPGY PGVRRSSTAF LVPYEQLSAK MQQLQRTGAR IISVNPA
