ID   QKIL4_ARATH             Reviewed;         283 AA.
AC   Q8GYR4; Q9C9Z4;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 112.
DE   RecName: Full=KH domain-containing protein At3g08620;
DE   AltName: Full=Quaking-like protein 4;
GN   OrderedLocusNames=At3g08620; ORFNames=F17O14.9;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130713; DOI=10.1038/35048706;
RA   Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA   Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA   Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA   Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA   Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA   Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA   Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA   Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA   Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA   Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA   Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA   de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA   Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA   Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA   Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA   Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA   Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA   Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA   Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA   Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA   Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA   Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT   "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL   Nature 408:820-822(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11910074; DOI=10.1126/science.1071006;
RA   Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA   Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA   Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA   Shinagawa A., Shinozaki K.;
RT   "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL   Science 296:141-145(2002).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=11809873; DOI=10.1093/nar/30.3.623;
RA   Lorkovic Z.J., Barta A.;
RT   "Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain
RT   RNA-binding proteins from the flowering plant Arabidopsis thaliana.";
RL   Nucleic Acids Res. 30:623-635(2002).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAG51340.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AC012562; AAG51340.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002686; AEE74654.1; -; Genomic_DNA.
DR   EMBL; AK117438; BAC42103.1; -; mRNA.
DR   RefSeq; NP_187474.2; NM_111696.3.
DR   AlphaFoldDB; Q8GYR4; -.
DR   SMR; Q8GYR4; -.
DR   STRING; 3702.AT3G08620.1; -.
DR   iPTMnet; Q8GYR4; -.
DR   PaxDb; Q8GYR4; -.
DR   PRIDE; Q8GYR4; -.
DR   ProteomicsDB; 236604; -.
DR   EnsemblPlants; AT3G08620.1; AT3G08620.1; AT3G08620.
DR   GeneID; 820009; -.
DR   Gramene; AT3G08620.1; AT3G08620.1; AT3G08620.
DR   KEGG; ath:AT3G08620; -.
DR   Araport; AT3G08620; -.
DR   TAIR; locus:2077818; AT3G08620.
DR   eggNOG; KOG1588; Eukaryota.
DR   HOGENOM; CLU_065679_0_1_1; -.
DR   InParanoid; Q8GYR4; -.
DR   OMA; APGMSMD; -.
DR   OrthoDB; 1565749at2759; -.
DR   PhylomeDB; Q8GYR4; -.
DR   PRO; PR:Q8GYR4; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q8GYR4; baseline and differential.
DR   Genevisible; Q8GYR4; AT.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   GO; GO:0048024; P:regulation of mRNA splicing, via spliceosome; IBA:GO_Central.
DR   Gene3D; 3.30.1370.10; -; 1.
DR   InterPro; IPR045071; BBP-like.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   InterPro; IPR032377; STAR_dimer.
DR   PANTHER; PTHR11208; PTHR11208; 1.
DR   Pfam; PF00013; KH_1; 1.
DR   Pfam; PF16544; STAR_dimer; 1.
DR   SMART; SM00322; KH; 1.
DR   SUPFAM; SSF54791; SSF54791; 1.
DR   PROSITE; PS50084; KH_TYPE_1; 1.
PE   2: Evidence at transcript level;
KW   Acetylation; Nucleus; Phosphoprotein; Reference proteome; RNA-binding.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZVI3"
FT   CHAIN           2..283
FT                   /note="KH domain-containing protein At3g08620"
FT                   /id="PRO_0000357031"
FT   DOMAIN          140..207
FT                   /note="KH"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT   REGION          256..283
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         2
FT                   /note="N-acetylserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZVI3"
FT   MOD_RES         261
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZVI3"
FT   MOD_RES         269
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9ZVI3"
SQ   SEQUENCE   283 AA;  31501 MW;  CF6EEAF3D8EF5D5B CRC64;
     MSGLYNYNNF SPSRAASPQI RTPSSDVDSQ YISQLLAEHQ KLGPFMQVLP ICSRLLNQEI
     FRITGMMPNQ GFTDFDRLRH RSPSPMASPN LMSNVSGGGL GGWNGLPPER IGGPHGMAME
     WQGAPASPSS YPVKRILRLD LPVDTYPNFN FVGRLLGPRG NSLKRVEATT GCRVYIRGKG
     SIKDPEKEEK LKGKPGYEHL NEQLHILIEA DLPIDIVDIK LRQAQEIIEE LVKPVDESQD
     YIKRQQLREL ALLNSNLREN SPGPSGSVSP FNSNAMKRPK TGR