QWRF2_ARATH
ID QWRF2_ARATH Reviewed; 659 AA.
AC Q94AI1; Q9C6C5; Q9C700;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 102.
DE RecName: Full=QWRF motif-containing protein 2;
GN Name=QWRF2; OrderedLocusNames=At1g49890; ORFNames=F10F5.10, T18C15.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20978221; DOI=10.1105/tpc.110.074781;
RA Albrecht V., Simkova K., Carrie C., Delannoy E., Giraud E., Whelan J.,
RA Small I.D., Apel K., Badger M.R., Pogson B.J.;
RT "The cytoskeleton and the peroxisomal-targeted snowy cotyledon3 protein are
RT required for chloroplast development in Arabidopsis.";
RL Plant Cell 22:3423-3438(2010).
CC -!- SIMILARITY: Belongs to the QWRF family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG51768.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAG60167.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC074110; AAG60167.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC079674; AAG51768.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE32488.1; -; Genomic_DNA.
DR EMBL; AY046022; AAK76696.1; -; mRNA.
DR EMBL; BT000999; AAN41399.1; -; mRNA.
DR RefSeq; NP_564558.1; NM_103876.3.
DR AlphaFoldDB; Q94AI1; -.
DR iPTMnet; Q94AI1; -.
DR PaxDb; Q94AI1; -.
DR PRIDE; Q94AI1; -.
DR ProteomicsDB; 236618; -.
DR EnsemblPlants; AT1G49890.1; AT1G49890.1; AT1G49890.
DR GeneID; 841412; -.
DR Gramene; AT1G49890.1; AT1G49890.1; AT1G49890.
DR KEGG; ath:AT1G49890; -.
DR Araport; AT1G49890; -.
DR TAIR; locus:2007233; AT1G49890.
DR eggNOG; ENOG502QYE5; Eukaryota.
DR HOGENOM; CLU_025164_2_0_1; -.
DR InParanoid; Q94AI1; -.
DR OMA; PIRGNIR; -.
DR OrthoDB; 655703at2759; -.
DR PhylomeDB; Q94AI1; -.
DR PRO; PR:Q94AI1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q94AI1; baseline and differential.
DR Genevisible; Q94AI1; AT.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005874; C:microtubule; IDA:TAIR.
DR GO; GO:0005880; C:nuclear microtubule; IBA:GO_Central.
DR GO; GO:0008017; F:microtubule binding; IBA:GO_Central.
DR GO; GO:0051225; P:spindle assembly; IBA:GO_Central.
DR InterPro; IPR007573; QWRF.
DR Pfam; PF04484; QWRF; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..659
FT /note="QWRF motif-containing protein 2"
FT /id="PRO_0000423623"
FT REGION 1..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 157..221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 291..317
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 340..359
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 371..429
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 468..471
FT /note="QWRF motif"
FT COMPBIAS 13..31
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..109
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 163..191
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 192..219
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 395..429
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 659 AA; 71534 MW; 3974BDC8DC489AC8 CRC64;
MVAAAISTTD PRNPPRDRPQ SLTNNGGQRR PRGKQVPSRY LSPSPSHSVS STTTTTTTTT
TTTSSSSSSS SSAILRTSKR YPSPSPLLSR STTNSASNSI KTPSLLPKRS QSVDRRRPSA
VSVTVGTEMS AATKMLITST RSLSVSFQGE AFSLPISKKK ETTSTPVSHR KSTPERRRST
PVRDQRENSK PVDQQRWPGA SRRGNSESVV PNSLSRSLDC GSDRGKLGSG FVGRSMLHNS
MIDESPRVSV NGRLSLDLGG RDEYLDIGDD IQRRPNNGLT SSVSCDFTAS DTDSVSSGST
NGVQECGSGV NGEISKSKSL PRNIMASARF WQETNSRLRR LQDPGSPLSS SPGLKTSSIS
SKFGLSKRFS SDAVPLSSPR GMASPVRGSA IRSASPSKLW ATTTSSPARA LSSPSRARNG
VSDQMNAYNR NNTPSILSFS ADIRRGKIGE DRVMDAHLLR LLYNRDLQWR FVNARADSTV
MVQRLNAEKN LWNAWVSISE LRHSVTLKRI KLLLLRQKLK LASILRGQMG FLEEWSLLDR
DHSSSLSGAT ESLKASTLRL PIVGKTVVDI QDLKHAVSSA VDVMQAMSSS IFSLTSKVDE
MNSVMVETVN VTAKEKVLLE RCQGCLSRVA AMQVTDCSMK THIIQLSRIP ITSSLTPQL
