QWRF3_ARATH
ID QWRF3_ARATH Reviewed; 482 AA.
AC Q8S8I1; F4IFJ5; Q5XVE3;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=QWRF motif-containing protein 3;
GN Name=QWRF3; OrderedLocusNames=At2g20815; ORFNames=F5H14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20978221; DOI=10.1105/tpc.110.074781;
RA Albrecht V., Simkova K., Carrie C., Delannoy E., Giraud E., Whelan J.,
RA Small I.D., Apel K., Badger M.R., Pogson B.J.;
RT "The cytoskeleton and the peroxisomal-targeted snowy cotyledon3 protein are
RT required for chloroplast development in Arabidopsis.";
RL Plant Cell 22:3423-3438(2010).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q8S8I1-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q8S8I1-2; Sequence=VSP_053217, VSP_053218;
CC -!- SIMILARITY: Belongs to the QWRF family. {ECO:0000305}.
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DR EMBL; AC006234; AAM15207.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07077.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07078.1; -; Genomic_DNA.
DR EMBL; AY735579; AAU44449.1; -; mRNA.
DR RefSeq; NP_001189563.1; NM_001202634.2. [Q8S8I1-2]
DR RefSeq; NP_565486.1; NM_127648.3. [Q8S8I1-1]
DR AlphaFoldDB; Q8S8I1; -.
DR PaxDb; Q8S8I1; -.
DR PRIDE; Q8S8I1; -.
DR ProteomicsDB; 226092; -. [Q8S8I1-1]
DR EnsemblPlants; AT2G20815.1; AT2G20815.1; AT2G20815. [Q8S8I1-1]
DR EnsemblPlants; AT2G20815.2; AT2G20815.2; AT2G20815. [Q8S8I1-2]
DR GeneID; 816612; -.
DR Gramene; AT2G20815.1; AT2G20815.1; AT2G20815. [Q8S8I1-1]
DR Gramene; AT2G20815.2; AT2G20815.2; AT2G20815. [Q8S8I1-2]
DR KEGG; ath:AT2G20815; -.
DR Araport; AT2G20815; -.
DR TAIR; locus:505006260; AT2G20815.
DR eggNOG; ENOG502QVNZ; Eukaryota.
DR HOGENOM; CLU_038518_0_0_1; -.
DR InParanoid; Q8S8I1; -.
DR OMA; FEMQERS; -.
DR PhylomeDB; Q8S8I1; -.
DR PRO; PR:Q8S8I1; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8S8I1; baseline and differential.
DR Genevisible; Q8S8I1; AT.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005880; C:nuclear microtubule; IBA:GO_Central.
DR GO; GO:0008017; F:microtubule binding; IBA:GO_Central.
DR GO; GO:0051225; P:spindle assembly; IBA:GO_Central.
DR InterPro; IPR007573; QWRF.
DR Pfam; PF04484; QWRF; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..482
FT /note="QWRF motif-containing protein 3"
FT /id="PRO_0000423624"
FT REGION 1..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 171..220
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 292..295
FT /note="QWRF motif"
FT COMPBIAS 1..19
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..50
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 190..220
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 19..47
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|Ref.3"
FT /id="VSP_053217"
FT VAR_SEQ 421
FT /note="T -> TQ (in isoform 2)"
FT /evidence="ECO:0000303|Ref.3"
FT /id="VSP_053218"
FT CONFLICT 435
FT /note="V -> G (in Ref. 3; AAU44449)"
FT /evidence="ECO:0000305"
FT CONFLICT 446..448
FT /note="CHD -> SHA (in Ref. 3; AAU44449)"
FT /evidence="ECO:0000305"
FT CONFLICT 461
FT /note="R -> G (in Ref. 3; AAU44449)"
FT /evidence="ECO:0000305"
FT CONFLICT 479..480
FT /note="LL -> FF (in Ref. 3; AAU44449)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 482 AA; 54298 MW; 286F1225D9A1C7A2 CRC64;
MKSCEHELLK TRRGKSREVS SRFLSSPSAS SSPNRRNSTS NSSRDDQNNN GVKGHLGLKK
HDRMSDGTRV CFGLPNQSSI EVDTKENRMP SPWINDEDNV ILPGRFSVDE CALYRASSRR
NSCSLLYESF NDETDSELSD VSCASSLSTN RSSWNHKPGI KVSSKYLHDL TAKPSKGNNK
TKLRSQDDSQ RTNSSKGIEN RLQRNNSVSR YGSSMSQWAL SPGRSLDTQA VTVPSSKLKP
PRGKGVGKLI NLGFDFFRSK NKSSPFTSPL KPKTCDTESA HQLKLMNNRL LQWRFVNARA
CDVNKNVASQ EKNQLLCAWD TLIKLNNLVL QERIKLQKKN LEMKLNYVFL SQVKHLEAWE
DMEIQHLSSL SIIRDSLHSV LSRLPLKEGA KVNLESAVSI IKNAEAVTDA IISTVDDYAP
TMEGIVPLAS QLAEVVVQEK LMLEKCHDLL RMISELEMQE RSLKCCFLIQ HKQTFDTNLL
KH
