R13L2_ARATH
ID R13L2_ARATH Reviewed; 847 AA.
AC Q9STE5;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=Putative disease resistance RPP13-like protein 2;
GN Name=RPP13L2; OrderedLocusNames=At3g46710; ORFNames=T6H20.260;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Potential disease resistance protein.
CC -!- DOMAIN: The LRR repeats probably act as specificity determinant of
CC pathogen recognition. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family. RPP13
CC subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=NIB-LRRS; Note=Functional and comparative genomics
CC of disease resistance gene homologs;
CC URL="http://niblrrs.ucdavis.edu";
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DR EMBL; AL096859; CAB51194.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78196.1; -; Genomic_DNA.
DR PIR; T12979; T12979.
DR RefSeq; NP_190255.1; NM_114538.2.
DR AlphaFoldDB; Q9STE5; -.
DR SMR; Q9STE5; -.
DR BioGRID; 9144; 2.
DR IntAct; Q9STE5; 1.
DR STRING; 3702.AT3G46710.1; -.
DR iPTMnet; Q9STE5; -.
DR PaxDb; Q9STE5; -.
DR PRIDE; Q9STE5; -.
DR EnsemblPlants; AT3G46710.1; AT3G46710.1; AT3G46710.
DR GeneID; 823824; -.
DR Gramene; AT3G46710.1; AT3G46710.1; AT3G46710.
DR KEGG; ath:AT3G46710; -.
DR Araport; AT3G46710; -.
DR TAIR; locus:2102857; AT3G46710.
DR eggNOG; KOG4658; Eukaryota.
DR HOGENOM; CLU_000837_25_4_1; -.
DR InParanoid; Q9STE5; -.
DR OMA; WESEALE; -.
DR OrthoDB; 463722at2759; -.
DR PhylomeDB; Q9STE5; -.
DR PRO; PR:Q9STE5; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9STE5; baseline and differential.
DR Genevisible; Q9STE5; AT.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0051707; P:response to other organism; IEA:UniProt.
DR CDD; cd14798; RX-CC_like; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.10.8.430; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038005; RX-like_CC.
DR InterPro; IPR041118; Rx_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR23155; PTHR23155; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF18052; Rx_N; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS51450; LRR; 2.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; Leucine-rich repeat; Nucleotide-binding;
KW Plant defense; Reference proteome; Repeat.
FT CHAIN 1..847
FT /note="Putative disease resistance RPP13-like protein 2"
FT /id="PRO_0000212727"
FT DOMAIN 142..446
FT /note="NB-ARC"
FT REPEAT 587..610
FT /note="LRR 1"
FT REPEAT 612..634
FT /note="LRR 2"
FT REPEAT 703..726
FT /note="LRR 3"
FT REPEAT 749..774
FT /note="LRR 4"
FT REPEAT 807..830
FT /note="LRR 5"
FT COILED 26..42
FT /evidence="ECO:0000255"
FT BINDING 191..198
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 847 AA; 98479 MW; 03C1F484A3C98696 CRC64;
MVDAITEFVV GKIDNYLIEE APMLIGVKDD LEELKTELTC IQVYLKNVEV CDKEDEVSKE
WTKLVLDIAY DVEDVLDTYF LKLEKRLHRL GLMRLTNIIS DKKDAYNILD DIKTLKRRTL
DVTRKLEMYG IGNFNEHRVV ASTSRVREVR RARSDDQEER VVGLTDDAKV LLTKLLDDDG
DNKIYMISIF GMEGLGKTSL ARKLFNSSDV KESFEYRVWT NVSGECNTRD ILMRIISSLE
ETSEGELEKM AQQELEVYLH DILQEKRYLV VVDDIWESEA LESLKRALPC SYQGSRVIIT
TSIRVVAEGR DKRVYTHNIR FLTFKESWNL FEKKAFRYIL KVDQELQKIG KEMVQKCGGL
PRTTVVLAGL MSRKKPNEWN DVWSSLRVKD DNIHVSSLFD LSFKDMGHEL KLCFLYLSVF
PEDYEVDVEK LIQLLVAEGF IQEDEEMTME DVARYYIEDL VYISLVEVVK RKKGKLMSFR
IHDLVREFTI KKSKELNFVN VYDEQHSSTT SRREVVHHLM DDNYLCDRRV NTQMRSFLFF
GKRRNDITYV ETITLKLKLL RVLNLGGLHF ICQGYSPWSL PDVIGGLVHL RYLGIADTVV
NNLPDFISNL RFLQTLDASG NSFERMTDLS NLTSLRHLTG RFIGELLIGD AVNLQTLRSI
SSYSWSKLKH ELLINLRDLE IYEFHILNDQ IKVPLDLVSL SKLKNLRVLK IEVVSFSLFS
EETVRFELLV KLTLHCDVRR LPRDMDLIFP SLESLTLVTN LQEDPMPTLQ KLQRLENLVL
YSCVYPGAKM FINAQGFGRL RKLKVIIKRL DELEIEEEAM PCLMKLNLDN KDGATKLMIP
DRMRAFV