R18A3_ARATH
ID R18A3_ARATH Reviewed; 178 AA.
AC Q9LUD4; Q8L9M5;
DT 06-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 124.
DE RecName: Full=60S ribosomal protein L18a-3;
GN Name=RPL18AC; OrderedLocusNames=At3g14600; ORFNames=MIE1.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL20 family.
CC {ECO:0000305}.
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DR EMBL; AB023038; BAB02392.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75546.1; -; Genomic_DNA.
DR EMBL; AY072540; AAL60048.1; -; mRNA.
DR EMBL; AY097377; AAM19893.1; -; mRNA.
DR EMBL; AY088351; AAM65890.1; -; mRNA.
DR RefSeq; NP_188078.1; NM_112321.3.
DR AlphaFoldDB; Q9LUD4; -.
DR SMR; Q9LUD4; -.
DR BioGRID; 6022; 37.
DR STRING; 3702.AT3G14600.1; -.
DR PaxDb; Q9LUD4; -.
DR PRIDE; Q9LUD4; -.
DR ProteomicsDB; 226094; -.
DR EnsemblPlants; AT3G14600.1; AT3G14600.1; AT3G14600.
DR GeneID; 820688; -.
DR Gramene; AT3G14600.1; AT3G14600.1; AT3G14600.
DR KEGG; ath:AT3G14600; -.
DR Araport; AT3G14600; -.
DR TAIR; locus:2089516; AT3G14600.
DR eggNOG; KOG0829; Eukaryota.
DR HOGENOM; CLU_080773_1_1_1; -.
DR InParanoid; Q9LUD4; -.
DR OMA; WGRNEVC; -.
DR OrthoDB; 1265349at2759; -.
DR PhylomeDB; Q9LUD4; -.
DR PRO; PR:Q9LUD4; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LUD4; baseline and differential.
DR Genevisible; Q9LUD4; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; HDA:TAIR.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0042788; C:polysomal ribosome; IDA:CAFA.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR HAMAP; MF_00273; Ribosomal_L18Ae; 1.
DR InterPro; IPR028877; 50S_L18Ae/Ribosomal_L18a/L20.
DR InterPro; IPR023573; Ribosomal_L18a//L18Ae/LX.
DR InterPro; IPR021138; Ribosomal_L18a/L20_eukaryotes.
DR PANTHER; PTHR10052; PTHR10052; 2.
DR Pfam; PF01775; Ribosomal_L18A; 1.
DR PIRSF; PIRSF002190; Ribosomal_L18a; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..178
FT /note="60S ribosomal protein L18a-3"
FT /id="PRO_0000213935"
FT CONFLICT 112
FT /note="M -> I (in Ref. 4; AAM65890)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 178 AA; 21309 MW; 28A1B900F3C4402B CRC64;
MGGFRFHQYQ VVGRALPTEN DEHPKIYRMK LWGRNEVCAK SKFWYFMRKL KKVKKSNGQM
LAINEIFEKN PTTIKNYGIW LRYQSRTGYH NMYKEYRDTT LNGGVEQMYT EMASRHRVRF
PCIQIIKTAT VPAKLCKREI TKQFHNSKIK FPLVFRKVRP PSRKLKTTYK ASKPNLFM