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R1A_CVH22
ID   R1A_CVH22               Reviewed;        4085 AA.
AC   P0C6U2; Q05002;
DT   10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
DT   10-JUN-2008, sequence version 1.
DT   03-AUG-2022, entry version 85.
DE   RecName: Full=Replicase polyprotein 1a;
DE            Short=pp1a;
DE   AltName: Full=ORF1a polyprotein;
DE   Contains:
DE     RecName: Full=Non-structural protein 1;
DE              Short=nsp1;
DE     AltName: Full=p9;
DE   Contains:
DE     RecName: Full=Non-structural protein 2;
DE              Short=nsp2;
DE     AltName: Full=p87;
DE   Contains:
DE     RecName: Full=Non-structural protein 3;
DE              Short=nsp3;
DE              EC=3.4.19.12;
DE              EC=3.4.22.-;
DE     AltName: Full=PL1-PRO/PL2-PRO;
DE     AltName: Full=PLP1/PLP2;
DE     AltName: Full=Papain-like proteinases 1/2;
DE     AltName: Full=p195;
DE   Contains:
DE     RecName: Full=Non-structural protein 4;
DE              Short=nsp4;
DE     AltName: Full=Peptide HD2;
DE   Contains:
DE     RecName: Full=3C-like proteinase;
DE              Short=3CL-PRO;
DE              Short=3CLp;
DE              EC=3.4.22.-;
DE     AltName: Full=M-PRO;
DE     AltName: Full=nsp5;
DE     AltName: Full=p34;
DE   Contains:
DE     RecName: Full=Non-structural protein 6;
DE              Short=nsp6;
DE   Contains:
DE     RecName: Full=Non-structural protein 7;
DE              Short=nsp7;
DE     AltName: Full=p5;
DE   Contains:
DE     RecName: Full=Non-structural protein 8;
DE              Short=nsp8;
DE     AltName: Full=p23;
DE   Contains:
DE     RecName: Full=Non-structural protein 9;
DE              Short=nsp9;
DE     AltName: Full=p12;
DE   Contains:
DE     RecName: Full=Non-structural protein 10;
DE              Short=nsp10;
DE     AltName: Full=Growth factor-like peptide;
DE              Short=GFL;
DE     AltName: Full=p16;
DE   Contains:
DE     RecName: Full=Non-structural protein 11;
DE              Short=nsp11;
GN   ORFNames=1a;
OS   Human coronavirus 229E (HCoV-229E).
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC   Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae;
OC   Alphacoronavirus; Duvinacovirus.
OX   NCBI_TaxID=11137;
OH   NCBI_TaxID=9606; Homo sapiens (Human).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=11369870; DOI=10.1099/0022-1317-82-6-1273;
RA   Thiel V., Herold J., Schelle B., Siddell S.G.;
RT   "Infectious RNA transcribed in vitro from a cDNA copy of the human
RT   coronavirus genome cloned in vaccinia virus.";
RL   J. Gen. Virol. 82:1273-1281(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=8337838; DOI=10.1006/viro.1993.1419;
RA   Herold J., Raabe T., Schelle-Prinz B., Siddell S.G.;
RT   "Nucleotide sequence of the human coronavirus 229E RNA polymerase locus.";
RL   Virology 195:680-691(1993).
RN   [3]
RP   CHARACTERIZATION OF 3CL-PRO, AND MUTAGENESIS OF HIS-3006; HIS-3028;
RP   ASN-3029; GLU-3074; THR-3099; CYS-3109; HIS-3127; HIS-3136 AND GLN-3267.
RX   PubMed=9094676; DOI=10.1128/jvi.71.5.3992-3997.1997;
RA   Ziebuhr J., Heusipp G., Siddell S.G.;
RT   "Biosynthesis, purification, and characterization of the human coronavirus
RT   229E 3C-like proteinase.";
RL   J. Virol. 71:3992-3997(1997).
RN   [4]
RP   ZINC-FINGER DOMAIN OF PL1-PRO, AND MUTAGENESIS OF LYS-1048; GLY-1099;
RP   GLY-1102; CYS-1126; CYS-1128; CYS-1154; LEU-1155; CYS-1157; CYS-1163;
RP   VAL-1175; CYS-1203 AND ASP-1218.
RX   PubMed=10329692; DOI=10.1074/jbc.274.21.14918;
RA   Herold J., Siddell S.G., Gorbalenya A.E.;
RT   "A human RNA viral cysteine proteinase that depends upon a unique Zn2+-
RT   binding finger connecting the two domains of a papain-like fold.";
RL   J. Biol. Chem. 274:14918-14925(1999).
RN   [5]
RP   ERRATUM OF PUBMED:10329692.
RA   Herold J., Siddell S.G., Gorbalenya A.E.;
RL   J. Biol. Chem. 274:21490-21490(1999).
RN   [6]
RP   PROTEOLYTIC PROCESSING OF POLYPROTEIN.
RX   PubMed=9847320; DOI=10.1128/jvi.73.1.177-185.1999;
RA   Ziebuhr J., Siddell S.G.;
RT   "Processing of the human coronavirus 229E replicase polyproteins by the
RT   virus-encoded 3C-like proteinase: identification of proteolytic products
RT   and cleavage sites common to pp1a and pp1ab.";
RL   J. Virol. 73:177-185(1999).
RN   [7]
RP   PROTEOLYTIC PROCESSING OF POLYPROTEIN, AND MUTAGENESIS OF CYS-1054 AND
RP   TRP-1702.
RX   PubMed=11431476; DOI=10.1074/jbc.m104097200;
RA   Ziebuhr J., Thiel V., Gorbalenya A.E.;
RT   "The autocatalytic release of a putative RNA virus transcription factor
RT   from its polyprotein precursor involves two paralogous papain-like
RT   proteases that cleave the same peptide bond.";
RL   J. Biol. Chem. 276:33220-33232(2001).
RN   [8]
RP   PROTEOLYTIC PROCESSING OF POLYPROTEIN.
RX   PubMed=11842254; DOI=10.1099/0022-1317-83-3-595;
RA   Hegyi A., Ziebuhr J.;
RT   "Conservation of substrate specificities among coronavirus main
RT   proteases.";
RL   J. Gen. Virol. 83:595-599(2002).
RN   [9]
RP   MUTAGENESIS OF ASN-3029.
RX   PubMed=11842253; DOI=10.1099/0022-1317-83-3-581;
RA   Hegyi A., Friebe A., Gorbalenya A.E., Ziebuhr J.;
RT   "Mutational analysis of the active centre of coronavirus 3C-like
RT   proteases.";
RL   J. Gen. Virol. 83:581-593(2002).
RN   [10]
RP   X-RAY CRYSTALLOGRAPHY (2.54 ANGSTROMS) OF 2966-3265.
RX   PubMed=12746549; DOI=10.1126/science.1085658;
RA   Anand K., Ziebuhr J., Wadhwani P., Mesters J.R., Hilgenfeld R.;
RT   "Coronavirus main proteinase (3CLpro) structure: basis for design of anti-
RT   SARS drugs.";
RL   Science 300:1763-1767(2003).
CC   -!- FUNCTION: The papain-like proteinase 1 (PLP1) and papain-like
CC       proteinase 2 (PLP2) are responsible for the cleavages located at the N-
CC       terminus of the replicase polyprotein. In addition, PLP2 possesses a
CC       deubiquitinating/deISGylating activity and processes both 'Lys-48'- and
CC       'Lys-63'-linked polyubiquitin chains from cellular substrates. PLP2
CC       also antagonizes innate immune induction of type I interferon by
CC       blocking the nuclear translocation of host IRF-3 (By similarity).
CC       {ECO:0000250}.
CC   -!- FUNCTION: [3C-like proteinase]: Responsible for the majority of
CC       cleavages as it cleaves the C-terminus of replicase polyprotein at 11
CC       sites. Recognizes substrates containing the core sequence [ILMVF]-Q-|-
CC       [SGACN]. Inhibited by the substrate-analog Cbz-Val-Asn-Ser-Thr-Leu-Gln-
CC       CMK. Also contains an ADP-ribose-1''-phosphate (ADRP)-binding function
CC       (By similarity). {ECO:0000255|PROSITE-ProRule:PRU00772}.
CC   -!- FUNCTION: Nsp7-nsp8 hexadecamer may possibly confer processivity to the
CC       polymerase, maybe by binding to dsRNA or by producing primers utilized
CC       by the latter. {ECO:0000250}.
CC   -!- FUNCTION: Nsp9 is a ssRNA-binding protein. {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=Thiol-dependent hydrolysis of ester, thioester, amide, peptide
CC         and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-
CC         residue protein attached to proteins as an intracellular targeting
CC         signal).; EC=3.4.19.12;
CC   -!- SUBUNIT: 3CL-PRO exists as monomer and homodimer. Eight copies of nsp7
CC       and eight copies of nsp8 assemble to form a heterohexadecamer. Nsp9 is
CC       a dimer. Nsp10 forms a dodecamer (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 3]: Host membrane
CC       {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 4]: Host membrane
CC       {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 6]: Host membrane
CC       {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 7]: Host cytoplasm, host
CC       perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 and nsp10 are
CC       localized in cytoplasmic foci, largely perinuclear. Late in infection,
CC       they merge into confluent complexes (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 8]: Host cytoplasm, host
CC       perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 and nsp10 are
CC       localized in cytoplasmic foci, largely perinuclear. Late in infection,
CC       they merge into confluent complexes (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 9]: Host cytoplasm, host
CC       perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 and nsp10 are
CC       localized in cytoplasmic foci, largely perinuclear. Late in infection,
CC       they merge into confluent complexes (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: [Non-structural protein 10]: Host cytoplasm, host
CC       perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 and nsp10 are
CC       localized in cytoplasmic foci, largely perinuclear. Late in infection,
CC       they merge into confluent complexes (By similarity). {ECO:0000250}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Ribosomal frameshifting; Named isoforms=2;
CC       Name=Replicase polyprotein 1a; Synonyms=pp1a, ORF1a polyprotein;
CC         IsoId=P0C6U2-1; Sequence=Displayed;
CC       Name=Replicase polyprotein 1ab; Synonyms=pp1ab;
CC         IsoId=P0C6X1-1; Sequence=External;
CC   -!- DOMAIN: The hydrophobic domains (HD) could mediate the membrane
CC       association of the replication complex and thereby alter the
CC       architecture of the host cell membrane.
CC   -!- PTM: Specific enzymatic cleavages in vivo by its own proteases yield
CC       mature proteins. 3CL-PRO and PL-PRO proteinases are autocatalytically
CC       processed. {ECO:0000269|PubMed:11431476, ECO:0000269|PubMed:11842254,
CC       ECO:0000269|PubMed:9847320}.
CC   -!- MISCELLANEOUS: [Isoform Replicase polyprotein 1a]: Produced by
CC       conventional translation.
CC   -!- SIMILARITY: Belongs to the coronaviruses polyprotein 1ab family.
CC       {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Protein Spotlight; Note=Proteic grace - Issue 77 of
CC       December 2006;
CC       URL="https://web.expasy.org/spotlight/back_issues/077";
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DR   EMBL; AF304460; AAG48590.1; -; Genomic_RNA.
DR   EMBL; X69721; CAA49377.1; -; Genomic_RNA.
DR   PIR; S28600; S28600.
DR   RefSeq; NP_073550.1; NC_002645.1. [P0C6U2-1]
DR   PDB; 1P9S; X-ray; 2.54 A; A/B=2966-3265.
DR   PDB; 2ZU2; X-ray; 1.80 A; A/B=2966-3267.
DR   PDB; 3EWQ; X-ray; 2.10 A; A=1269-1436.
DR   PDB; 3EWR; X-ray; 2.01 A; A=1269-1436.
DR   PDBsum; 1P9S; -.
DR   PDBsum; 2ZU2; -.
DR   PDBsum; 3EWQ; -.
DR   PDBsum; 3EWR; -.
DR   SASBDB; P0C6U2; -.
DR   SMR; P0C6U2; -.
DR   MEROPS; C30.003; -.
DR   PRIDE; P0C6U2; -.
DR   DNASU; 918764; -.
DR   GeneID; 918764; -.
DR   SABIO-RK; P0C6U2; -.
DR   EvolutionaryTrace; P0C6U2; -.
DR   Proteomes; UP000006716; Genome.
DR   GO; GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:UniProtKB-EC.
DR   GO; GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
DR   GO; GO:0008242; F:omega peptidase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016740; F:transferase activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0039520; P:induction by virus of host autophagy; IEA:UniProtKB-KW.
DR   GO; GO:0039648; P:modulation by virus of host protein ubiquitination; IEA:UniProtKB-KW.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   GO; GO:0039548; P:suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity; IEA:UniProtKB-KW.
DR   GO; GO:0019079; P:viral genome replication; IEA:InterPro.
DR   GO; GO:0019082; P:viral protein processing; IEA:InterPro.
DR   CDD; cd21558; alphaCoV-Nsp6; 1.
DR   CDD; cd21665; alphaCoV_Nsp5_Mpro; 1.
DR   CDD; cd21514; cv_alpha_Nsp2_HCoV-229E-like; 1.
DR   CDD; cd21473; cv_Nsp4_TM; 1.
DR   CDD; cd21557; Macro_X_Nsp3-like; 1.
DR   CDD; cd21466; Ubl2_cv_PLpro_N_Nsp3-like; 1.
DR   Gene3D; 1.10.150.420; -; 1.
DR   Gene3D; 1.10.1840.10; -; 1.
DR   Gene3D; 1.10.8.1190; -; 2.
DR   Gene3D; 1.10.8.370; -; 1.
DR   Gene3D; 2.30.30.1000; -; 1.
DR   Gene3D; 2.40.10.10; -; 2.
DR   Gene3D; 2.40.10.250; -; 1.
DR   Gene3D; 3.30.70.3540; -; 1.
DR   Gene3D; 3.40.220.10; -; 1.
DR   InterPro; IPR038634; A-CoV_nsp1_sf.
DR   InterPro; IPR023298; ATPase_P-typ_TM_dom_sf.
DR   InterPro; IPR043613; CoV_NSP2_C.
DR   InterPro; IPR043611; CoV_NSP3_C.
DR   InterPro; IPR032505; CoV_NSP4_C.
DR   InterPro; IPR043612; CoV_NSP4_N.
DR   InterPro; IPR002589; Macro_dom.
DR   InterPro; IPR043472; Macro_dom-like.
DR   InterPro; IPR044371; Macro_X_NSP3-like.
DR   InterPro; IPR036333; NSP10_sf_CoV.
DR   InterPro; IPR044385; NSP2_HCoV-229E-like.
DR   InterPro; IPR043615; NSP2_N_CoV.
DR   InterPro; IPR044357; NSP3_Ubl1_dom_CoV.
DR   InterPro; IPR044353; Nsp3_Ubl2_dom_CoV.
DR   InterPro; IPR038123; NSP4_C_sf_CoV.
DR   InterPro; IPR044309; NSP5_Mpro_alphaCoV.
DR   InterPro; IPR044369; NSP6_alphaCoV.
DR   InterPro; IPR043610; NSP6_CoV.
DR   InterPro; IPR014828; NSP7_CoV.
DR   InterPro; IPR037204; NSP7_sf_CoV.
DR   InterPro; IPR014829; NSP8_CoV.
DR   InterPro; IPR037230; NSP8_sf_CoV.
DR   InterPro; IPR014822; NSP9_CoV.
DR   InterPro; IPR036499; NSP9_sf_CoV.
DR   InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR   InterPro; IPR013016; Peptidase_C16_CoV.
DR   InterPro; IPR008740; Peptidase_C30_CoV.
DR   InterPro; IPR043477; Peptidase_C30_dom3_CoV.
DR   InterPro; IPR009003; Peptidase_S1_PA.
DR   InterPro; IPR043504; Peptidase_S1_PA_chymotrypsin.
DR   InterPro; IPR043178; PLpro_thumb_sf_CoV.
DR   InterPro; IPR018995; RNA_synth_NSP10_CoV.
DR   Pfam; PF09401; CoV_NSP10; 1.
DR   Pfam; PF19212; CoV_NSP2_C; 2.
DR   Pfam; PF19211; CoV_NSP2_N; 1.
DR   Pfam; PF19218; CoV_NSP3_C; 1.
DR   Pfam; PF16348; CoV_NSP4_C; 1.
DR   Pfam; PF19217; CoV_NSP4_N; 1.
DR   Pfam; PF19213; CoV_NSP6; 1.
DR   Pfam; PF08716; CoV_NSP7; 1.
DR   Pfam; PF08717; CoV_NSP8; 1.
DR   Pfam; PF08710; CoV_NSP9; 1.
DR   Pfam; PF08715; CoV_peptidase; 2.
DR   Pfam; PF01661; Macro; 1.
DR   Pfam; PF05409; Peptidase_C30; 1.
DR   SMART; SM00506; A1pp; 1.
DR   SUPFAM; SSF101816; SSF101816; 1.
DR   SUPFAM; SSF140367; SSF140367; 1.
DR   SUPFAM; SSF143076; SSF143076; 1.
DR   SUPFAM; SSF144246; SSF144246; 1.
DR   SUPFAM; SSF50494; SSF50494; 1.
DR   SUPFAM; SSF51126; SSF51126; 1.
DR   SUPFAM; SSF52949; SSF52949; 1.
DR   SUPFAM; SSF81665; SSF81665; 1.
DR   PROSITE; PS51952; COV_EXON_MTASE_COACT; 1.
DR   PROSITE; PS51962; COV_NSP1; 1.
DR   PROSITE; PS51991; COV_NSP2_C; 1.
DR   PROSITE; PS51990; COV_NSP2_M; 1.
DR   PROSITE; PS51989; COV_NSP2_N; 1.
DR   PROSITE; PS51992; COV_NSP3_Y3; 1.
DR   PROSITE; PS51943; COV_NSP3A_UBL; 1.
DR   PROSITE; PS51944; COV_NSP3D_UBL; 1.
DR   PROSITE; PS51946; COV_NSP4C; 1.
DR   PROSITE; PS51949; COV_NSP7; 1.
DR   PROSITE; PS51950; COV_NSP8; 1.
DR   PROSITE; PS51951; COV_NSP9_SSRNA_BD; 1.
DR   PROSITE; PS51442; M_PRO; 1.
DR   PROSITE; PS51154; MACRO; 1.
DR   PROSITE; PS51124; PEPTIDASE_C16; 2.
PE   1: Evidence at protein level;
KW   3D-structure; Activation of host autophagy by virus; Host cytoplasm;
KW   Host membrane; Host-virus interaction; Hydrolase;
KW   Inhibition of host innate immune response by virus;
KW   Inhibition of host IRF3 by virus; Inhibition of host RLR pathway by virus;
KW   Membrane; Metal-binding;
KW   Modulation of host ubiquitin pathway by viral deubiquitinase;
KW   Modulation of host ubiquitin pathway by virus; Protease;
KW   Reference proteome; Repeat; Ribosomal frameshifting; RNA-binding;
KW   Thiol protease; Transmembrane; Transmembrane helix;
KW   Ubl conjugation pathway; Viral immunoevasion; Zinc; Zinc-finger.
FT   CHAIN           1..4085
FT                   /note="Replicase polyprotein 1a"
FT                   /id="PRO_0000338182"
FT   CHAIN           1..111
FT                   /note="Non-structural protein 1"
FT                   /id="PRO_0000338183"
FT   CHAIN           112..897
FT                   /note="Non-structural protein 2"
FT                   /id="PRO_0000338184"
FT   CHAIN           898..2484
FT                   /note="Non-structural protein 3"
FT                   /id="PRO_0000338185"
FT   CHAIN           2485..2965
FT                   /note="Non-structural protein 4"
FT                   /id="PRO_0000338186"
FT   CHAIN           2966..3267
FT                   /note="3C-like proteinase"
FT                   /id="PRO_0000338187"
FT   CHAIN           3268..3546
FT                   /note="Non-structural protein 6"
FT                   /id="PRO_0000338188"
FT   CHAIN           3547..3629
FT                   /note="Non-structural protein 7"
FT                   /id="PRO_0000338189"
FT   CHAIN           3630..3824
FT                   /note="Non-structural protein 8"
FT                   /id="PRO_0000338190"
FT   CHAIN           3825..3933
FT                   /note="Non-structural protein 9"
FT                   /id="PRO_0000338191"
FT   CHAIN           3934..4068
FT                   /note="Non-structural protein 10"
FT                   /id="PRO_0000338192"
FT   CHAIN           4069..4085
FT                   /note="Non-structural protein 11"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000338193"
FT   TRANSMEM        1998..2018
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2068..2088
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2095..2115
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2491..2511
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2731..2751
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2755..2775
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2782..2802
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2809..2829
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        2834..2854
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        3281..3301
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        3304..3324
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        3328..3348
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        3367..3387
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        3401..3421
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        3422..3442
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        3467..3487
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   DOMAIN          2..109
FT                   /note="CoV Nsp1 globular"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01307"
FT   DOMAIN          113..359
FT                   /note="CoV Nsp2 N-terminal"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01333"
FT   DOMAIN          389..775
FT                   /note="CoV Nsp2 middle"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01334"
FT   DOMAIN          773..897
FT                   /note="CoV Nsp2 C-terminal"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01335"
FT   DOMAIN          898..993
FT                   /note="Ubiquitin-like 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00214"
FT   DOMAIN          1016..1268
FT                   /note="Peptidase C16 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   DOMAIN          1269..1436
FT                   /note="Macro"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00490"
FT   DOMAIN          1600..1655
FT                   /note="Ubiquitin-like 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00214"
FT   DOMAIN          1663..1914
FT                   /note="Peptidase C16 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   DOMAIN          2379..2483
FT                   /note="CoV Nsp3 Y3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01336"
FT   DOMAIN          2870..2965
FT                   /note="Nsp4C"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01291"
FT   DOMAIN          2966..3267
FT                   /note="Peptidase C30"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00772"
FT   DOMAIN          3547..3629
FT                   /note="RdRp Nsp7 cofactor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01294"
FT   DOMAIN          3630..3824
FT                   /note="RdRp Nsp8 cofactor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01295"
FT   DOMAIN          3825..3933
FT                   /note="Nsp9 ssRNA-binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01296"
FT   DOMAIN          3934..4072
FT                   /note="ExoN/MTase coactivator"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   ZN_FING         1126..1157
FT                   /note="C4-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   ZN_FING         1780..1815
FT                   /note="C4-type 2; atypical"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   ZN_FING         4007..4023
FT                   /evidence="ECO:0000250"
FT   ZN_FING         4049..4062
FT                   /evidence="ECO:0000250"
FT   REGION          246..266
FT                   /note="C4"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01333"
FT   REGION          1925..2115
FT                   /note="HD1"
FT   REGION          2491..2854
FT                   /note="HD2"
FT   REGION          3281..3487
FT                   /note="HD3"
FT   ACT_SITE        1054
FT                   /note="For PL1-PRO activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   ACT_SITE        1205
FT                   /note="For PL1-PRO activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   ACT_SITE        1701
FT                   /note="For PL2-PRO activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   ACT_SITE        1863
FT                   /note="For PL2-PRO activity"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00444"
FT   ACT_SITE        3006
FT                   /note="For 3CL-PRO activity"
FT   ACT_SITE        3109
FT                   /note="For 3CL-PRO activity"
FT   BINDING         246
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01333"
FT   BINDING         248
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01333"
FT   BINDING         265
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01333"
FT   BINDING         266
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01333"
FT   BINDING         4007
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   BINDING         4010
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   BINDING         4016
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   BINDING         4023
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   BINDING         4049
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   BINDING         4052
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   BINDING         4060
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   BINDING         4062
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01297"
FT   SITE            111..112
FT                   /note="Cleavage; by PL1-PRO"
FT   SITE            897..898
FT                   /note="Cleavage; by PL1-PRO"
FT   SITE            2484..2485
FT                   /note="Cleavage; by PL2-PRO"
FT   SITE            2965..2966
FT                   /note="Cleavage; by 3CL-PRO"
FT   SITE            3267..3268
FT                   /note="Cleavage; by 3CL-PRO"
FT   SITE            3546..3547
FT                   /note="Cleavage; by 3CL-PRO"
FT   SITE            3629..3630
FT                   /note="Cleavage; by 3CL-PRO"
FT   SITE            3824..3825
FT                   /note="Cleavage; by 3CL-PRO"
FT   SITE            3933..3934
FT                   /note="Cleavage; by 3CL-PRO"
FT   SITE            4068..4069
FT                   /note="Cleavage; by 3CL-PRO"
FT   MUTAGEN         1048
FT                   /note="K->E: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1054
FT                   /note="C->A,G,S: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:11431476"
FT   MUTAGEN         1099
FT                   /note="G->A: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1099
FT                   /note="G->P: No effect."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1102
FT                   /note="G->A,S: No effect."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1126
FT                   /note="C->D,H: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1128
FT                   /note="C->A,D,P: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1154
FT                   /note="C->A,H,D: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1155
FT                   /note="Missing: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1157
FT                   /note="C->A,D,H,P: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1163
FT                   /note="C->A,D: No effect."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1175
FT                   /note="V->H,P: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1175
FT                   /note="V->N,T: No effect."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1203
FT                   /note="C->A: Complete loss of PL1-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1203
FT                   /note="C->D: No effect."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1218
FT                   /note="D->A,E,H,K,N,Q: No effect."
FT                   /evidence="ECO:0000269|PubMed:10329692"
FT   MUTAGEN         1702
FT                   /note="W->L: Complete loss of PL2-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:11431476"
FT   MUTAGEN         3006
FT                   /note="H->G,S,T,Y: Complete loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3028
FT                   /note="H->G,T: No loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3029
FT                   /note="N->A,D,E,Q: Increase of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:11842253,
FT                   ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3029
FT                   /note="N->G: No loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:11842253,
FT                   ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3029
FT                   /note="N->P: 95% loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:11842253,
FT                   ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3074
FT                   /note="E->H: No loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3099
FT                   /note="T->D: Complete loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3109
FT                   /note="C->P,S,V: Complete loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3127
FT                   /note="H->S: Complete loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3136
FT                   /note="H->A: 67% loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3136
FT                   /note="H->S: 77% loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3136
FT                   /note="H->T: 93% loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   MUTAGEN         3267
FT                   /note="Q->A: No loss of 3CL-PRO activity."
FT                   /evidence="ECO:0000269|PubMed:9094676"
FT   CONFLICT        1982
FT                   /note="A -> Q (in Ref. 1)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        4042
FT                   /note="F -> S (in Ref. 1)"
FT                   /evidence="ECO:0000305"
FT   STRAND          1275..1278
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   STRAND          1281..1285
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   HELIX           1288..1294
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   STRAND          1298..1304
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   HELIX           1313..1321
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   TURN            1322..1324
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   HELIX           1325..1333
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   STRAND          1345..1350
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   STRAND          1353..1359
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   HELIX           1367..1380
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   STRAND          1381..1383
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   STRAND          1385..1387
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   HELIX           1399..1409
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   STRAND          1415..1419
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   HELIX           1422..1433
FT                   /evidence="ECO:0007829|PDB:3EWR"
FT   HELIX           2976..2979
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          2982..2987
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          2990..2997
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3000..3004
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3005..3008
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3018..3024
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3027..3029
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3030..3034
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3037..3039
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3041..3047
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3050..3057
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3064..3067
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3075..3093
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3112..3117
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3120..3130
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3136..3139
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3146..3148
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3151..3154
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3165..3177
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3191..3199
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   TURN            3200..3202
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3209..3212
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3213..3219
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3223..3233
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   STRAND          3245..3247
FT                   /evidence="ECO:0007829|PDB:2ZU2"
FT   HELIX           3254..3262
FT                   /evidence="ECO:0007829|PDB:2ZU2"
SQ   SEQUENCE   4085 AA;  454215 MW;  EAB38E3D375F36B5 CRC64;
     MACNRVTLAV ASDSEISANG CSTIAQAVRR YSEAASNGFR ACRFVSLDLQ DCIVGIADDT
     YVMGLHGNQT LFCNIMKFSD RPFMLHGWLV FSNSNYLLEE FDVVFGKRGG GNVTYTDQYL
     CGADGKPVMS EDLWQFVDHF GENEEIIING HTYVCAWLTK RKPLDYKRQN NLAIEEIEYV
     HGDALHTLRN GSVLEMAKEV KTSSKVVLSD ALDKLYKVFG SPVMTNGSNI LEAFTKPVFI
     SALVQCTCGT KSWSVGDWTG FKSSCCNVIS NKLCVVPGNV KPGDAVITTQ QAGAGIKYFC
     GMTLKFVANI EGVSVWRVIA LQSVDCFVAS STFVEEEHVN RMDTFCFNVR NSVTDECRLA
     MLGAEMTSNV RRQVASGVID ISTGWFDVYD DIFAESKPWF VRKAEDIFGP CWSALASALK
     QLKVTTGELV RFVKSICNSA VAVVGGTIQI LASVPEKFLN AFDVFVTAIQ TVFDCAVETC
     TIAGKAFDKV FDYVLLDNAL VKLVTTKLKG VRERGLNKVK YATVVVGSTE EVKSSRVERS
     TAVLTIANNY SKLFDEGYTV VIGDVAYFVS DGYFRLMASP NSVLTTAVYK PLFAFNVNVM
     GTRPEKFPTT VTCENLESAV LFVNDKITEF QLDYSIDVID NEIIVKPNIS LCVPLYVRDY
     VDKWDDFCRQ YSNESWFEDD YRAFISVLDI TDAAVKAAES KAFVDTIVPP CPSILKVIDG
     GKIWNGVIKN VNSVRDWLKS LKLNLTQQGL LGTCAKRFKR WLGILLEAYN AFLDTVVSTV
     KIGGLTFKTY AFDKPYIVIR DIVCKVENKT EAEWIELFPH NDRIKSFSTF ESAYMPIADP
     THFDIEEVEL LDAEFVEPGC GGILAVIDEH VFYKKDGVYY PSNGTNILPV AFTKAAGGKV
     SFSDDVEVKD IEPVYRVKLC FEFEDEKLVD VCEKAIGKKI KHEGDWDSFC KTIQSALSVV
     SCYVNLPTYY IYDEEGGNDL SLPVMISEWP LSVQQAQQEA TLPDIAEDVV DQVEEVNSIF
     DIETVDVKHD VSPFEMPFEE LNGLKILKQL DNNCWVNSVM LQIQLTGILD GDYAMQFFKM
     GRVAKMIERC YTAEQCIRGA MGDVGLCMYR LLKDLHTGFM VMDYKCSCTS GRLEESGAVL
     FCTPTKKAFP YGTCLNCNAP RMCTIRQLQG TIIFVQQKPE PVNPVSFVVK PVCSSIFRGA
     VSCGHYQTNI YSQNLCVDGF GVNKIQPWTN DALNTICIKD ADYNAKVEIS VTPIKNTVDT
     TPKEEFVVKE KLNAFLVHDN VAFYQGDVDT VVNGVDFDFI VNAANENLAH GGGLAKALDV
     YTKGKLQRLS KEHIGLAGKV KVGTGVMVEC DSLRIFNVVG PRKGKHERDL LIKAYNTINN
     EQGTPLTPIL SCGIFGIKLE TSLEVLLDVC NTKEVKVFVY TDTEVCKVKD FVSGLVNVQK
     VEQPKIEPKP VSVIKVAPKP YRVDGKFSYF TEDLLCVADD KPIVLFTDSM LTLDDRGLAL
     DNALSGVLSA AIKDCVDINK AIPSGNLIKF DIGSVVVYMC VVPSEKDKHL DNNVQRCTRK
     LNRLMCDIVC TIPADYILPL VLSSLTCNVS FVGELKAAEA KVITIKVTED GVNVHDVTVT
     TDKSFEQQVG VIADKDKDLS GAVPSDLNTS ELLTKAIDVD WVEFYGFKDA VTFATVDHSA
     FAYESAVVNG IRVLKTSDNN CWVNAVCIAL QYSKPHFISQ GLDAAWNKFV LGDVEIFVAF
     VYYVARLMKG DKGDAEDTLT KLSKYLANEA QVQLEHYSSC VECDAKFKNS VASINSAIVC
     ASVKRDGVQV GYCVHGIKYY SRVRSVRGRA IIVSVEQLEP CAQSRLLSGV AYTAFSGPVD
     KGHYTVYDTA KKSMYDGDRF VKHDLSLLSV TSVVMVGGYV APVNTVKPKP VINQLDEKAQ
     KFFDFGDFLI HNFVIFFTWL LSMFTLCKTA VTTGDVKIMA KAPQRTGVVL KRSLKYNLKA
     SAAVLKSKWW LLAKFTKLLL LIYTLYSVVL LCVRFGPFNF CSETVNGYAK SNFVKDDYCD
     GSLGCKMCLF GYQELSQFSH LDVVWKHITD PLFSNMQPFI VMVLLLIFGD NYLRCFLLYF
     VAQMISTVGV FLGYKETNWF LHFIPFDVIC DELLVTVIVI KVISFVRHVL FGCENPDCIA
     CSKSARLKRF PVNTIVNGVQ RSFYVNANGG SKFCKKHRFF CVDCDSYGYG STFITPEVSR
     ELGNITKTNV QPTGPAYVMI DKVEFENGFY RLYSCETFWR YNFDITESKY SCKEVFKNCN
     VLDDFIVFNN NGTNVTQVKN ASVYFSQLLC RPIKLVDSEL LSTLSVDFNG VLHKAYIDVL
     RNSFGKDLNA NMSLAECKRA LGLSISDHEF TSAISNAHRC DVLLSDLSFN NFVSSYAKPE
     EKLSAYDLAC CMRAGAKVVN ANVLTKDQTP IVWHAKDFNS LSAEGRKYIV KTSKAKGLTF
     LLTINENQAV TQIPATSIVA KQGAGDAGHS LTWLWLLCGL VCLIQFYLCF FMPYFMYDIV
     SSFEGYDFKY IENGQLKNFE APLKCVRNVF ENFEDWHYAK FGFTPLNKQS CPIVVGVSEI
     VNTVAGIPSN VYLVGKTLIF TLQAAFGNAG VCYDIFGVTT PEKCIFTSAC TRLEGLGGNN
     VYCYNTALME GSLPYSSIQA NAYYKYDNGN FIKLPEVIAQ GFGFRTVRTI ATKYCRVGEC
     VESNAGVCFG FDKWFVNDGR VANGYVCGTG LWNLVFNILS MFSSSFSVAA MSGQILLNCA
     LGAFAIFCCF LVTKFRRMFG DLSVGVCTVV VAVLLNNVSY IVTQNLVTMI AYAILYFFAT
     RSLRYAWIWC AAYLIAYISF APWWLCAWYF LAMLTGLLPS LLKLKVSTNL FEGDKFVGTF
     ESAAAGTFVI DMRSYEKLAN SISPEKLKSY AASYNRYKYY SGNANEADYR CACYAYLAKA
     MLDFSRDHND ILYTPPTVSY GSTLQAGLRK MAQPSGFVEK CVVRVCYGNT VLNGLWLGDI
     VYCPRHVIAS NTTSAIDYDH EYSIMRLHNF SIISGTAFLG VVGATMHGVT LKIKVSQTNM
     HTPRHSFRTL KSGEGFNILA CYDGCAQGVF GVNMRTNWTI RGSFINGACG SPGYNLKNGE
     VEFVYMHQIE LGSGSHVGSS FDGVMYGGFE DQPNLQVESA NQMLTVNVVA FLYAAILNGC
     TWWLKGEKLF VEHYNEWAQA NGFTAMNGED AFSILAAKTG VCVERLLHAI QVLNNGFGGK
     QILGYSSLND EFSINEVVKQ MFGVNLQSGK TTSMFKSISL FAGFFVMFWA ELFVYTTTIW
     VNPGFLTPFM ILLVALSLCL TFVVKHKVLF LQVFLLPSII VAAIQNCAWD YHVTKVLAEK
     FDYNVSVMQM DIQGFVNIFI CLFVALLHTW RFAKERCTHW CTYLFSLIAV LYTALYSYDY
     VSLLVMLLCA ISNEWYIGAI IFRICRFGVA FLPVEYVSYF DGVKTVLLFY MLLGFVSCMY
     YGLLYWINRF CKCTLGVYDF CVSPAEFKYM VANGLNAPNG PFDALFLSFK LMGIGGPRTI
     KVSTVQSKLT DLKCTNVVLM GILSNMNIAS NSKEWAYCVE MHNKINLCDD PETAQELLLA
     LLAFFLSKHS DFGLGDLVDS YFENDSILQS VASSFVGMPS FVAYETARQE YENAVANGSS
     PQIIKQLKKA MNVAKAEFDR ESSVQKKINR MAEQAAAAMY KEARAVNRKS KVVSAMHSLL
     FGMLRRLDMS SVDTILNMAR NGVVPLSVIP ATSAARLVVV VPDHDSFVKM MVDGFVHYAG
     VVWTLQEVKD NDGKNVHLKD VTKENQEILV WPLILTCERV VKLQNNEIMP GKMKVKATKG
     EGDGGITSEG NALYNNEGGR AFMYAYVTTK PGMKYVKWEH DSGVVTVELE PPCRFVIDTP
     TGPQIKYLYF VKNLNNLRRG AVLGYIGATV RLQAGKQTEF VSNSHLLTHC SFAVDPAAAY
     LDAVKQGAKP VGNCVKMLTN GSGSGQAITC TIDSNTTQDT YGGASVCIYC RAHVAHPTMD
     GFCQYKGKWV QVPIGTNDPI RFCLENTVCK VCGCWLNHGC TCDRTAIQSF DNSYLNESGA
     LVPLD
 
 
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