R1B13_SOLDE
ID R1B13_SOLDE Reviewed; 1141 AA.
AC Q6L3Z0;
DT 02-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 57.
DE RecName: Full=Putative late blight resistance protein homolog R1B-13;
GN Name=R1B-13; ORFNames=PGEC872C13.7;
OS Solanum demissum (Wild potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=50514;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=16167894; DOI=10.1111/j.1365-313x.2005.02506.x;
RA Kuang H., Wei F., Marano M.R., Wirtz U., Wang X., Liu J., Shum W.P.,
RA Zaborsky J., Tallon L.J., Rensink W., Lobst S., Zhang P., Tornqvist C.-E.,
RA Tek A., Bamberg J., Helgeson J., Fry W., You F., Luo M.-C., Jiang J.,
RA Buell C.R., Baker B.;
RT "The R1 resistance gene cluster contains three groups of independently
RT evolving, type I R1 homologues and shows substantial structural variation
RT among haplotypes of Solanum demissum.";
RL Plant J. 44:37-51(2005).
CC -!- FUNCTION: Confers resistance to late blight (Phytophthora infestans)
CC races carrying the avirulence gene Avr1. Resistance proteins guard the
CC plant against pathogens that contain an appropriate avirulence protein
CC via an indirect interaction with this avirulence protein. That triggers
CC a defense system including the hypersensitive response, which restricts
CC the pathogen growth.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Membrane {ECO:0000250};
CC Peripheral membrane protein {ECO:0000250}.
CC -!- MISCELLANEOUS: This protein is encoded by the haplotype B genome of the
CC allohexaploid Solanum demissum.
CC -!- SIMILARITY: Belongs to the disease resistance NB-LRR family.
CC {ECO:0000305}.
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DR EMBL; AC149266; AAT38785.1; -; Genomic_DNA.
DR AlphaFoldDB; Q6L3Z0; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0009626; P:plant-type hypersensitive response; IEA:UniProtKB-KW.
DR CDD; cd14798; RX-CC_like; 1.
DR Gene3D; 1.10.8.430; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR021929; Late_blight_resistance_R1.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038005; RX-like_CC.
DR PANTHER; PTHR23155; PTHR23155; 2.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF12061; NB-LRR; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Coiled coil; Cytoplasm; Hypersensitive response;
KW Leucine-rich repeat; Membrane; Nucleotide-binding; Plant defense; Repeat.
FT CHAIN 1..1141
FT /note="Putative late blight resistance protein homolog R1B-
FT 13"
FT /id="PRO_0000233967"
FT DOMAIN 516..742
FT /note="NB-ARC"
FT REPEAT 826..851
FT /note="LRR 1"
FT REPEAT 869..894
FT /note="LRR 2"
FT REPEAT 992..1016
FT /note="LRR 3"
FT REPEAT 1017..1041
FT /note="LRR 4"
FT REPEAT 1043..1068
FT /note="LRR 5"
FT COILED 417..437
FT /evidence="ECO:0000255"
SQ SEQUENCE 1141 AA; 132370 MW; 47066EAA59873D80 CRC64;
MTKRVITDRL RSTLQDSNYS DVGRDLINFI LWELKFLDCF LHLKSLPFAS ECCMLDVSQK
MIEILKSRIL SICPDSGIQL WKGNLSMKTL YLEDVRVTLD SFGYWKEVIW KTKQEFSAEY
SFPNTSLAAN KVDDVSPKFV MEVIDVFVEN LNVVVKINDP ISWLFVPEHK EQIEQVLKEL
KLLRFFVWFV SNKYIEPQYQ HTTFYIHALI EASHISMAVW LHLPVCSKGN QNLAPSEVSR
LLSDFVEMKI KATEPGISRN NIYIDVLQDL KLTIPQAQKK HAAESGIVEI LTHSMMVGLS
DQMANLQEML CLLRDNLIHL PILDLEFHLQ DMDSIIVDAG LLIYSLYDIK GEKEDTTLED
INRELGFDLP RNIEPIKVIV YLVMQKAFQC NLPRIHGLGY VDFLLKNLKD FQGRYSDSLA
FLKNQIQVIQ MEFEILQPFL KVVVEEPHNK FKRLNEDCAI QIIRKAHEVE YVVDACINKG
IPHWCLERWL QDIIEETTCI KAKIQEKNTV EDTMKTVITH TSSQLARTPR MNEEIVWFKD
VIENLRNRLL NGTKGQDVIS IHSMPGLGKT TLANRLYSDR SIVSQFDICA QCCVSQVYSY
KELLLALLCD AIGEGSDQHR EIHANELADM LRKTLLPRRY LILVDDVWEN SAWDDLRGCF
PDVNNRSRII LTTRHHEVAK YASVHSEPLH LRMFEEDESW KLLEKRVFGE ESCSPLLKDV
GLRIAKMCRQ LPLSIVLVAD VLLDFCKERA AEENFLLWIK RDQITKAAYS HKQHTHLALT
EMDTLLEWST SGSLVGSVLF KNYDPYFVRS LLSSHAFEIS HILPHFKFLK VLDLEHQVVI
DFIPTELPYL RYFSALIHQN SIPSSISNLW NLETLILKGT SAKTLLLPST VWDMVKLGYL
YIPNFSPENK KALLENSPKL DDLETLSNPY FARVEDAELM LRKTPNLRKL ICEVECLEYP
HQYHVLNFPV QLEILKFYRS KASKTIPFCI SAPNLKYLKL SGYYLDSQYL SETVDHLKHL
EVLKLYNVEF GDYREWEVSN GKFPQLKILK LENLSLMKWI VADDAFPILE QLVLHDCRDL
MEIPSCFMDI LSLKYIEVDM SNKSVVKSAK NIEETQVEDN QNTNFKLVII KVHYWEKLYS
A