RA54B_CHICK
ID RA54B_CHICK Reviewed; 918 AA.
AC Q9DG67;
DT 16-AUG-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=DNA repair and recombination protein RAD54B;
DE EC=3.6.4.-;
DE AltName: Full=RAD54 homolog B;
GN Name=RAD54B;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Testis;
RA Yamaguchi-Iwai Y.;
RT "Rad54b, a Rad54-related gene product, is involved in recombinational DNA
RT repair.";
RL Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in DNA repair and mitotic recombination.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. {ECO:0000305}.
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DR EMBL; AF178529; AAG09308.1; -; mRNA.
DR RefSeq; NP_990041.1; NM_204710.1.
DR AlphaFoldDB; Q9DG67; -.
DR SMR; Q9DG67; -.
DR STRING; 9031.ENSGALP00000025665; -.
DR PaxDb; Q9DG67; -.
DR GeneID; 395449; -.
DR KEGG; gga:395449; -.
DR CTD; 25788; -.
DR VEuPathDB; HostDB:geneid_395449; -.
DR eggNOG; KOG0390; Eukaryota.
DR InParanoid; Q9DG67; -.
DR OrthoDB; 93727at2759; -.
DR PhylomeDB; Q9DG67; -.
DR PRO; PR:Q9DG67; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.10810; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; DNA damage; DNA repair; DNA-binding; Helicase; Hydrolase;
KW Nucleotide-binding; Nucleus; Reference proteome.
FT CHAIN 1..918
FT /note="DNA repair and recombination protein RAD54B"
FT /id="PRO_0000074342"
FT DOMAIN 320..487
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 653..817
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 842..873
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 438..441
FT /note="DEGH box"
FT COMPBIAS 842..862
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 333..340
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 918 AA; 102878 MW; B4DB2AEA45006685 CRC64;
MRRSAAPSQV LGNVAKKPRF IPPGKSNALC PKIETEETDQ DVKLKEIGEK HGNASLFSEM
FSENQSENFT QSVESSGKVK STKAWNSTSK CSKLEMKTQS APKADAMHLP TSGMAKEAAA
QEEPDCLTKY FSVMWCKASK KKHKKWEGDA ILITKGKSVI LKDMEGKDIG RGTGYKSKEL
DSLEEGQTLM IGGKEIEVMG VISADDFSSG RCFQAGIATH DTVPTALPQT TMKQFCKPIK
SACQPSTKEN ILLNPQSCKP RHNPNDTNSL VMPRPNASHQ CMFNKAGLPV VDVVVDPYIA
NNLRPHQREG IVFLYECVMG MRVSGRFGAI LADEMGLGKT LQCISLVWTL LRQGVYGCKP
VLKRALIVTP GSLVKNWKKE FQKWLGSERI KVFTVDQDHK VEEFISSPLY SVMIISYEML
LRSLDQIQAI EFNLLICDEG HRLKNSSIKT TTALTNLSCE RRIILTGTPI QNDLQEFYAL
IEFVNPGVLG SLSTYRKIYE EPIVRSREPS ATKEEKDLGE KRAAELTRLT GLFILRRTQE
VINKFLPPKK ENIIFCQPTA LQLELYRKLL SSRVISSCLQ GRLENSPHLI CIGALKKLCN
HPCLLFKALK EKCCDPKSDE HVESSLYEGL TDVFPQDYTS DTFSEIDSGK LQVLVKLLAA
IRELSSSERV VLVSNYTQTL NVLLETCKCY GYSYTRLDGN TPVSQRQQIV DSFNSKFSPA
FIFLLSSKAG GVGLNLVGAS HLILYDIDWN PATDIQAMAR VWRDGQKCTV HIYRLLTTGT
IEEKIYQRQI SKQDLSGAVV DLSKTSEHIH FSVEELRNLF TLHENSSCVT HDLLECDCMG
NKDHQNPSSK KPSVSRCCQL RQDQGKHNSK KPLSMSQLMQ WKHFSGQHQA LPDPFLERIK
ENVSFIFQNV TNATSPTQ