RAB28_BOVIN
ID RAB28_BOVIN Reviewed; 221 AA.
AC Q3SWY9;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Ras-related protein Rab-28;
DE Flags: Precursor;
GN Name=RAB28;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Uterus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Lipid-anchor
CC {ECO:0000250}; Cytoplasmic side {ECO:0000250}. Cytoplasm, cytoskeleton,
CC cilium basal body. Note=Expressed in the basal body and ciliary rootlet
CC of the photoreceptors. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the small GTPase superfamily. Rab family.
CC {ECO:0000305}.
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DR EMBL; BC104592; AAI04593.1; -; mRNA.
DR RefSeq; NP_001029806.1; NM_001034634.1.
DR AlphaFoldDB; Q3SWY9; -.
DR SMR; Q3SWY9; -.
DR BioGRID; 192596; 82.
DR STRING; 9913.ENSBTAP00000004180; -.
DR PaxDb; Q3SWY9; -.
DR PRIDE; Q3SWY9; -.
DR Ensembl; ENSBTAT00000004180; ENSBTAP00000004180; ENSBTAG00000003218.
DR GeneID; 536021; -.
DR KEGG; bta:536021; -.
DR CTD; 9364; -.
DR VEuPathDB; HostDB:ENSBTAG00000003218; -.
DR VGNC; VGNC:33635; RAB28.
DR eggNOG; KOG0078; Eukaryota.
DR GeneTree; ENSGT00940000161833; -.
DR HOGENOM; CLU_041217_10_4_1; -.
DR InParanoid; Q3SWY9; -.
DR OMA; YIYGSHA; -.
DR OrthoDB; 1144210at2759; -.
DR TreeFam; TF313852; -.
DR Proteomes; UP000009136; Chromosome 6.
DR Bgee; ENSBTAG00000003218; Expressed in spermatid and 107 other tissues.
DR ExpressionAtlas; Q3SWY9; baseline.
DR GO; GO:0036064; C:ciliary basal body; ISS:UniProtKB.
DR GO; GO:0035253; C:ciliary rootlet; ISS:UniProtKB.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0019003; F:GDP binding; ISS:UniProtKB.
DR GO; GO:0005525; F:GTP binding; ISS:UniProtKB.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:1901998; P:toxin transport; IEA:Ensembl.
DR GO; GO:0016192; P:vesicle-mediated transport; IBA:GO_Central.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR001806; Small_GTPase.
DR Pfam; PF00071; Ras; 1.
DR SMART; SM00174; RHO; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51419; RAB; 1.
PE 2: Evidence at transcript level;
KW Acetylation; Cell membrane; Cell projection; Cytoplasm; Cytoskeleton;
KW GTP-binding; Lipoprotein; Membrane; Methylation; Nucleotide-binding;
KW Phosphoprotein; Prenylation; Reference proteome.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:P51157"
FT CHAIN 2..218
FT /note="Ras-related protein Rab-28"
FT /id="PRO_0000260530"
FT PROPEP 219..221
FT /note="Removed in mature form"
FT /evidence="ECO:0000250"
FT /id="PRO_0000396720"
FT MOTIF 41..49
FT /note="Effector region"
FT /evidence="ECO:0000250"
FT BINDING 19..27
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 68..72
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 129..132
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 159..161
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT MOD_RES 2
FT /note="N-acetylserine"
FT /evidence="ECO:0000250|UniProtKB:P51157"
FT MOD_RES 8
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P51157"
FT MOD_RES 218
FT /note="Cysteine methyl ester"
FT /evidence="ECO:0000250"
FT LIPID 218
FT /note="S-farnesyl cysteine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 221 AA; 24743 MW; 9DFAC504247D4A46 CRC64;
MSDSEEESLD RQLKIVVLGD GTSGKTSLAT CFAQETFGKQ YKQTIGLDFF LRRITLPGSL
NVTLQVWDIG GQTIGGKMLD KYIYGAQGVL LVYDVTNYQS FENLEDWYSV VKKVSEESET
QPLVALVGNK IDLEHMRTVK PEKHLRFCQE NGFSSHFVSA KTGDSVFLCF QKVAAEILGI
KLNKAEIEQS QRVVKADIVN YNQEPMSRTV NPPRSSMCAV Q