RAB6A_CHICK
ID RAB6A_CHICK Reviewed; 208 AA.
AC Q1KME6;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Ras-related protein Rab-6A;
GN Name=RAB6A;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Adipose tissue;
RA Dong B., Meng H., Gu Z.L., Gong D.Q.;
RT "Cloning and sequence analysis of the chicken RAB6 gene.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Protein transport. Regulator of membrane traffic from the
CC Golgi apparatus towards the endoplasmic reticulum (ER). Involved in
CC COPI-independent retrograde transport from the Golgi to the ER.
CC {ECO:0000250|UniProtKB:P20340}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000250|UniProtKB:P20340}; Lipid-anchor
CC {ECO:0000250|UniProtKB:P20340}.
CC -!- SIMILARITY: Belongs to the small GTPase superfamily. Rab family.
CC {ECO:0000305}.
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DR EMBL; DQ470138; ABF00126.1; -; mRNA.
DR RefSeq; NP_001038105.1; NM_001044640.1.
DR AlphaFoldDB; Q1KME6; -.
DR SMR; Q1KME6; -.
DR STRING; 9031.ENSGALP00000030639; -.
DR Ensembl; ENSGALT00000031276; ENSGALP00000030639; ENSGALG00000017320.
DR GeneID; 419063; -.
DR KEGG; gga:419063; -.
DR CTD; 5870; -.
DR VEuPathDB; HostDB:geneid_419063; -.
DR eggNOG; KOG0094; Eukaryota.
DR GeneTree; ENSGT00940000154769; -.
DR HOGENOM; CLU_041217_10_2_1; -.
DR InParanoid; Q1KME6; -.
DR OMA; PVSNDGC; -.
DR OrthoDB; 1277051at2759; -.
DR PhylomeDB; Q1KME6; -.
DR Reactome; R-GGA-6798695; Neutrophil degranulation.
DR Reactome; R-GGA-6811436; COPI-independent Golgi-to-ER retrograde traffic.
DR Reactome; R-GGA-6811438; Intra-Golgi traffic.
DR Reactome; R-GGA-6811440; Retrograde transport at the Trans-Golgi-Network.
DR Reactome; R-GGA-8854214; TBC/RABGAPs.
DR Reactome; R-GGA-8876198; RAB GEFs exchange GTP for GDP on RABs.
DR PRO; PR:Q1KME6; -.
DR Proteomes; UP000000539; Chromosome 1.
DR Bgee; ENSGALG00000017320; Expressed in brain and 13 other tissues.
DR ExpressionAtlas; Q1KME6; baseline and differential.
DR GO; GO:0005829; C:cytosol; IEA:GOC.
DR GO; GO:0005794; C:Golgi apparatus; ISS:UniProtKB.
DR GO; GO:0000139; C:Golgi membrane; ISS:UniProtKB.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IBA:GO_Central.
DR GO; GO:0006891; P:intra-Golgi vesicle-mediated transport; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IBA:GO_Central.
DR GO; GO:0034067; P:protein localization to Golgi apparatus; ISS:UniProtKB.
DR GO; GO:0042147; P:retrograde transport, endosome to Golgi; IBA:GO_Central.
DR GO; GO:0006890; P:retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum; ISS:UniProtKB.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR001806; Small_GTPase.
DR Pfam; PF00071; Ras; 1.
DR SMART; SM00174; RHO; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51419; RAB; 1.
PE 2: Evidence at transcript level;
KW Acetylation; ER-Golgi transport; Golgi apparatus; GTP-binding; Lipoprotein;
KW Membrane; Methylation; Nucleotide-binding; Prenylation; Protein transport;
KW Reference proteome; Transport.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..208
FT /note="Ras-related protein Rab-6A"
FT /id="PRO_0000260745"
FT MOTIF 42..50
FT /note="Effector region"
FT /evidence="ECO:0000250"
FT BINDING 20..27
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 45
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 68..72
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 126..129
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT MOD_RES 2
FT /note="N-acetylserine"
FT /evidence="ECO:0000250"
FT MOD_RES 208
FT /note="Cysteine methyl ester"
FT /evidence="ECO:0000250"
FT LIPID 206
FT /note="S-geranylgeranyl cysteine"
FT /evidence="ECO:0000250"
FT LIPID 208
FT /note="S-geranylgeranyl cysteine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 208 AA; 23491 MW; CBF8DD283D0A5931 CRC64;
MSAGGDFGNP LRKFKLVFLG EQSVGKTSLI TRFMYDSFDN TYQATIGIDF LSKTMYLEDR
TIRLQLWDTA GQERFRSLIP SYIRDSAAAV VVYDITNVNS FQQTTKWIDD VRTERGSDVI
IMLVGNKTDL ADKRQVSIEE GERKAKELNV MFIETSAKAG YNVKQLFRRV AAALPGMEST
QDKSREDMID IKLEKPQEQP VSEGGCSC