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RABG1_ARATH
ID   RABG1_ARATH             Reviewed;         204 AA.
AC   Q948K6; Q9FK99;
DT   03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT   01-DEC-2001, sequence version 1.
DT   03-AUG-2022, entry version 121.
DE   RecName: Full=Ras-related protein RABG1;
DE            Short=AtRABG1;
DE   AltName: Full=Ras-related protein Rab78;
DE            Short=AtRab78;
GN   Name=RABG1; Synonyms=RAB78; OrderedLocusNames=At5g39620; ORFNames=MIJ24.90;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RA   Ueda T., Wada Y., Nakano A.;
RT   "Rab7 homologs in Arabidopsis thaliana.";
RL   Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA   Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT   features of the regions of 1,367,185 bp covered by 19 physically assigned
RT   P1 and TAC clones.";
RL   DNA Res. 5:203-216(1998).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12644670; DOI=10.1104/pp.013052;
RA   Vernoud V., Horton A.C., Yang Z., Nielsen E.;
RT   "Analysis of the small GTPase gene superfamily of Arabidopsis.";
RL   Plant Physiol. 131:1191-1208(2003).
CC   -!- FUNCTION: Intracellular vesicle trafficking and protein transport.
CC       {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Lipid-anchor
CC       {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the small GTPase superfamily. Rab family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAB08894.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AB071853; BAB68378.1; -; mRNA.
DR   EMBL; AB012243; BAB08894.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002688; AED94455.1; -; Genomic_DNA.
DR   RefSeq; NP_568566.1; NM_123324.1.
DR   AlphaFoldDB; Q948K6; -.
DR   SMR; Q948K6; -.
DR   STRING; 3702.AT5G39620.1; -.
DR   SwissPalm; Q948K6; -.
DR   PaxDb; Q948K6; -.
DR   PRIDE; Q948K6; -.
DR   ProteomicsDB; 236388; -.
DR   EnsemblPlants; AT5G39620.1; AT5G39620.1; AT5G39620.
DR   GeneID; 833958; -.
DR   Gramene; AT5G39620.1; AT5G39620.1; AT5G39620.
DR   KEGG; ath:AT5G39620; -.
DR   Araport; AT5G39620; -.
DR   TAIR; locus:2164905; AT5G39620.
DR   eggNOG; KOG0394; Eukaryota.
DR   HOGENOM; CLU_041217_10_6_1; -.
DR   InParanoid; Q948K6; -.
DR   OMA; MGNKTDV; -.
DR   OrthoDB; 1426655at2759; -.
DR   PhylomeDB; Q948K6; -.
DR   PRO; PR:Q948K6; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q948K6; baseline and differential.
DR   Genevisible; Q948K6; AT.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005774; C:vacuolar membrane; IBA:GO_Central.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.50.300; -; 1.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR005225; Small_GTP-bd_dom.
DR   InterPro; IPR001806; Small_GTPase.
DR   Pfam; PF00071; Ras; 1.
DR   SMART; SM00174; RHO; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR00231; small_GTP; 1.
DR   PROSITE; PS51419; RAB; 1.
PE   2: Evidence at transcript level;
KW   Cell membrane; GTP-binding; Lipoprotein; Membrane; Methylation;
KW   Nucleotide-binding; Prenylation; Protein transport; Reference proteome;
KW   Transport.
FT   CHAIN           1..204
FT                   /note="Ras-related protein RABG1"
FT                   /id="PRO_0000407360"
FT   MOTIF           34..42
FT                   /note="Effector region"
FT                   /evidence="ECO:0000250"
FT   BINDING         12..19
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250"
FT   BINDING         60..64
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250"
FT   BINDING         122..125
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250"
FT   BINDING         155..156
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0000250"
FT   MOD_RES         204
FT                   /note="Cysteine methyl ester"
FT                   /evidence="ECO:0000250"
FT   LIPID           202
FT                   /note="S-geranylgeranyl cysteine"
FT                   /evidence="ECO:0000250"
FT   LIPID           204
FT                   /note="S-geranylgeranyl cysteine"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   204 AA;  23496 MW;  56F5E7E990853489 CRC64;
     MEKTKLKIIL LGDSGVGKTS LLKRYNDKDF KQLHNSTIYV DLVTKEICIA ERQVILQIWD
     TAGQERFKSL PSRFYRDTDC CVLVYDVNTL KTFESIDNWH DEFIKQANPE TPTKFPFVLM
     GNKTDVNNGK PRVVAKEIAD QWCGSKGNIV YFETSAKAKI NVEEAFLEIA KKALTNERQI
     DDMERYRSVV PTIEKETPRS RCSC
 
 
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