RABG1_ARATH
ID RABG1_ARATH Reviewed; 204 AA.
AC Q948K6; Q9FK99;
DT 03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Ras-related protein RABG1;
DE Short=AtRABG1;
DE AltName: Full=Ras-related protein Rab78;
DE Short=AtRab78;
GN Name=RABG1; Synonyms=RAB78; OrderedLocusNames=At5g39620; ORFNames=MIJ24.90;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Ueda T., Wada Y., Nakano A.;
RT "Rab7 homologs in Arabidopsis thaliana.";
RL Submitted (SEP-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT features of the regions of 1,367,185 bp covered by 19 physically assigned
RT P1 and TAC clones.";
RL DNA Res. 5:203-216(1998).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12644670; DOI=10.1104/pp.013052;
RA Vernoud V., Horton A.C., Yang Z., Nielsen E.;
RT "Analysis of the small GTPase gene superfamily of Arabidopsis.";
RL Plant Physiol. 131:1191-1208(2003).
CC -!- FUNCTION: Intracellular vesicle trafficking and protein transport.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Lipid-anchor
CC {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the small GTPase superfamily. Rab family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB08894.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB071853; BAB68378.1; -; mRNA.
DR EMBL; AB012243; BAB08894.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED94455.1; -; Genomic_DNA.
DR RefSeq; NP_568566.1; NM_123324.1.
DR AlphaFoldDB; Q948K6; -.
DR SMR; Q948K6; -.
DR STRING; 3702.AT5G39620.1; -.
DR SwissPalm; Q948K6; -.
DR PaxDb; Q948K6; -.
DR PRIDE; Q948K6; -.
DR ProteomicsDB; 236388; -.
DR EnsemblPlants; AT5G39620.1; AT5G39620.1; AT5G39620.
DR GeneID; 833958; -.
DR Gramene; AT5G39620.1; AT5G39620.1; AT5G39620.
DR KEGG; ath:AT5G39620; -.
DR Araport; AT5G39620; -.
DR TAIR; locus:2164905; AT5G39620.
DR eggNOG; KOG0394; Eukaryota.
DR HOGENOM; CLU_041217_10_6_1; -.
DR InParanoid; Q948K6; -.
DR OMA; MGNKTDV; -.
DR OrthoDB; 1426655at2759; -.
DR PhylomeDB; Q948K6; -.
DR PRO; PR:Q948K6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q948K6; baseline and differential.
DR Genevisible; Q948K6; AT.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005774; C:vacuolar membrane; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR001806; Small_GTPase.
DR Pfam; PF00071; Ras; 1.
DR SMART; SM00174; RHO; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS51419; RAB; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; GTP-binding; Lipoprotein; Membrane; Methylation;
KW Nucleotide-binding; Prenylation; Protein transport; Reference proteome;
KW Transport.
FT CHAIN 1..204
FT /note="Ras-related protein RABG1"
FT /id="PRO_0000407360"
FT MOTIF 34..42
FT /note="Effector region"
FT /evidence="ECO:0000250"
FT BINDING 12..19
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 60..64
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 122..125
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT BINDING 155..156
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250"
FT MOD_RES 204
FT /note="Cysteine methyl ester"
FT /evidence="ECO:0000250"
FT LIPID 202
FT /note="S-geranylgeranyl cysteine"
FT /evidence="ECO:0000250"
FT LIPID 204
FT /note="S-geranylgeranyl cysteine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 204 AA; 23496 MW; 56F5E7E990853489 CRC64;
MEKTKLKIIL LGDSGVGKTS LLKRYNDKDF KQLHNSTIYV DLVTKEICIA ERQVILQIWD
TAGQERFKSL PSRFYRDTDC CVLVYDVNTL KTFESIDNWH DEFIKQANPE TPTKFPFVLM
GNKTDVNNGK PRVVAKEIAD QWCGSKGNIV YFETSAKAKI NVEEAFLEIA KKALTNERQI
DDMERYRSVV PTIEKETPRS RCSC