RABP1_HIPCM
ID RABP1_HIPCM Reviewed; 137 AA.
AC Q6T499;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Cellular retinoic acid-binding protein 1;
DE AltName: Full=Cellular retinoic acid-binding protein I;
DE Short=CRABP-I;
GN Name=crabp1;
OS Hippocampus comes (Tiger tail seahorse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus.
OX NCBI_TaxID=109280;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=15720396; DOI=10.1111/j.1742-4658.2005.04556.x;
RA Melamed P., Xue Y., Poon J.F., Wu Q., Xie H., Yeo J., Foo T.W., Chua H.K.;
RT "The male seahorse synthesizes and secretes a novel C-type lectin into the
RT brood pouch during early pregnancy.";
RL FEBS J. 272:1221-1235(2005).
CC -!- FUNCTION: Cytosolic CRABPs may regulate the access of retinoic acid to
CC the nuclear retinoic acid receptors. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- DOMAIN: Forms a beta-barrel structure that accommodates hydrophobic
CC ligands in its interior. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the calycin superfamily. Fatty-acid binding
CC protein (FABP) family. {ECO:0000305}.
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DR EMBL; AY437393; AAR11382.1; -; mRNA.
DR RefSeq; XP_019742309.1; XM_019886750.1.
DR AlphaFoldDB; Q6T499; -.
DR SMR; Q6T499; -.
DR STRING; 109280.ENSHCOP00000027026; -.
DR PRIDE; Q6T499; -.
DR Ensembl; ENSHCOT00000022765; ENSHCOP00000027026; ENSHCOG00000018495.
DR GeneID; 109525887; -.
DR KEGG; hcq:109525887; -.
DR GeneTree; ENSGT00940000159422; -.
DR OMA; NGDHFYI; -.
DR OrthoDB; 1417203at2759; -.
DR Proteomes; UP000264820; Unplaced.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016918; F:retinal binding; IEA:UniProtKB-KW.
DR GO; GO:0001972; F:retinoic acid binding; IEA:InterPro.
DR GO; GO:0019841; F:retinol binding; IEA:UniProtKB-KW.
DR GO; GO:0034653; P:retinoic acid catabolic process; IEA:InterPro.
DR Gene3D; 2.40.128.20; -; 1.
DR InterPro; IPR012674; Calycin.
DR InterPro; IPR031279; CRABP1.
DR InterPro; IPR000463; Fatty_acid-bd.
DR InterPro; IPR031259; ILBP.
DR InterPro; IPR000566; Lipocln_cytosolic_FA-bd_dom.
DR PANTHER; PTHR11955; PTHR11955; 1.
DR PANTHER; PTHR11955:SF62; PTHR11955:SF62; 1.
DR Pfam; PF00061; Lipocalin; 1.
DR PRINTS; PR00178; FATTYACIDBP.
DR SUPFAM; SSF50814; SSF50814; 1.
DR PROSITE; PS00214; FABP; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Retinol-binding; Transport; Vitamin A.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..137
FT /note="Cellular retinoic acid-binding protein 1"
FT /id="PRO_0000067411"
FT MOTIF 21..31
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000250"
FT BINDING 132..134
FT /ligand="all-trans-retinoate"
FT /ligand_id="ChEBI:CHEBI:35291"
FT /evidence="ECO:0000250"
SQ SEQUENCE 137 AA; 15738 MW; B0343E3092998FB2 CRC64;
MPNFAGTWKM KSSENFDELL KALGVNAMLR KLAVTAASKP HVEIQQNGEQ FYIRTYTTIR
TTEINFHIGE EFNEETVDGR KCKSLATWET ENKMYCKQTL LSGNGPKTFW TRELRGDELI
LTFGADDVVC TRIYMRA