RAD5_CANAL
ID RAD5_CANAL Reviewed; 1084 AA.
AC Q5ACX1; A0A1D8PG21;
DT 10-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 12-APR-2017, sequence version 2.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=DNA repair protein RAD5;
DE EC=3.6.4.-;
GN Name=RAD5; OrderedLocusNames=CAALFM_C200350WA;
GN ORFNames=CaO19.2097, CaO19.9644;
OS Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
OX NCBI_TaxID=237561;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=15123810; DOI=10.1073/pnas.0401648101;
RA Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
RA Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
RA Scherer S.;
RT "The diploid genome sequence of Candida albicans.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
RA van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
RA Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
RA Chibana H., Nantel A., Magee P.T.;
RT "Assembly of the Candida albicans genome into sixteen supercontigs aligned
RT on the eight chromosomes.";
RL Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
RC STRAIN=SC5314 / ATCC MYA-2876;
RX PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
RA Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
RT "Assembly of a phased diploid Candida albicans genome facilitates allele-
RT specific measurements and provides a simple model for repeat and indel
RT structure.";
RL Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
CC -!- FUNCTION: Probable helicase, member of the UBC2/RAD6 epistasis group.
CC Functions with DNA repair protein RAD18 in error-free postreplication
CC DNA repair. Involved in the maintenance of wild-type rates of
CC instability of simple repetitive sequences such as poly(GT) repeats.
CC Seems to be involved in maintaining a balance which acts in favor of
CC error-prone non-homologous joining during DNA double-strand breaks
CC repairs (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. {ECO:0000305}.
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DR EMBL; CP017624; AOW27089.1; -; Genomic_DNA.
DR RefSeq; XP_719543.2; XM_714450.2.
DR BioGRID; 1221851; 1.
DR STRING; 237561.Q5ACX1; -.
DR PRIDE; Q5ACX1; -.
DR GeneID; 3638827; -.
DR KEGG; cal:CAALFM_C200350WA; -.
DR CGD; CAL0000193075; orf19.9644.
DR VEuPathDB; FungiDB:C2_00350W_A; -.
DR eggNOG; KOG1001; Eukaryota.
DR HOGENOM; CLU_000315_2_5_1; -.
DR InParanoid; Q5ACX1; -.
DR OrthoDB; 132523at2759; -.
DR PRO; PR:Q5ACX1; -.
DR Proteomes; UP000000559; Chromosome 2.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0008094; F:ATP-dependent activity, acting on DNA; IBA:GO_Central.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IBA:GO_Central.
DR Gene3D; 3.30.40.10; -; 1.
DR Gene3D; 3.40.50.10810; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR014905; HIRAN.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08797; HIRAN; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00910; HIRAN; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW ATP-binding; Cytoplasm; DNA damage; DNA repair; DNA-binding; Helicase;
KW Hydrolase; Metal-binding; Nucleotide-binding; Nucleus; Reference proteome;
KW Zinc; Zinc-finger.
FT CHAIN 1..1084
FT /note="DNA repair protein RAD5"
FT /id="PRO_0000056119"
FT DOMAIN 450..643
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT DOMAIN 913..1071
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT ZN_FING 816..863
FT /note="RING-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
FT REGION 11..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 594..597
FT /note="DEGH box"
FT COMPBIAS 35..50
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 463..470
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
SQ SEQUENCE 1084 AA; 125021 MW; E8B89C9ECF45B415 CRC64;
MKVIKKRFFK PKEETLPSDE VPDPQSSAEP LHSLFVPDES EEEETTTSPK TNFEKDIIAI
VGDISPIIMK YLYAKYSQKR NGAKFAVTEL LTNPPDVEKL QQDSIASQSA KRPHTIVSYQ
EPPNKKVNIN PDSASSNNEP LMWQRLIGSL NIQAMATXPD HETVEIPGKX KLKRITTKNS
TMANSAIVRV YHNEREIGRI PEDWTRILSP LFDLNIAVFE ASVLEETKSR LSTGDSFVIE
IEVYLTNSSF AKNLDATENP IDLKKSNFDY SKESESEAAL RLRQFAISNL FDRLAIKPLK
VNDDTEDEED ISSQEINSGD VEHPVPEINL DQMKEFYQSN NQLKILEGLP ETTTPPKENF
ALDLRSYQKH GLSWMLAREK ELDVLEMLSN EDKLSSQSRK ELENLGTMNP LWRKYKWPYA
TEATQDPTQN QTEKYFYANM YNGELSLEKP VIKSSLRGGI LADEMGLGKT IATLALVNSV
PYDNFPEPKS DRPYASQTTL IVVPMSLLFQ WKSEFEKCNN NSRHVCRLHY GEDQETNLAW
SLCNPDNSKI PIVMITTYGT VLNEFTRLSK RRNSKGELPK VGLYSVKFFR IILDEGHNIR
NRNTKTAKSV YELQSSRKWI LTGTPIVNRL DDLYSLTKFL ELDPWNNFSY WKTFVTLPFE
QKKISQTLDV VKSILEPIFL RRTKSQKKNG KPLVELPAKE VVIEQIKFND DEEKLYQWFK
DRAYASFAEG IKSGQLLRRY TQILTHILRL RQVCCHVDLI GGAHEMDDEI IEAEQDEDMR
KFLTSIKENQ IRFANDTDVK EKMYNLYGKI KEENECSICT QVPIPYSEMV VTPCAHTFCL
SCILEHLDFQ KELKKEKLCP NCRSPISKYQ LFRIRNQPTK GNEIRFHIQK DAPDYSFQLY
LYDPNRSSSK IQALVRHLKA LHSQSPNSKV IVFSQFSSYL DIIQSELKLA SEEFIVFKFD
GRLNMNDRTK LLESFNQPLE DGKVAILLLS LKAGGVGLNL TTASRAYMMD PWWSPSIEDQ
AIDRIHRIGQ NETVKVVRFI MENSIETKML KIQERKKQIG EAVAAEEEER RKRRIEEIQI
LFEE