RALYL_XENTR
ID RALYL_XENTR Reviewed; 291 AA.
AC Q0VFL7;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=RNA-binding Raly-like protein;
GN Name=ralyl;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RRM HNRPC family. RALY subfamily.
CC {ECO:0000305}.
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DR EMBL; BC118782; AAI18783.1; -; mRNA.
DR RefSeq; NP_001072213.1; NM_001078745.1.
DR AlphaFoldDB; Q0VFL7; -.
DR SMR; Q0VFL7; -.
DR STRING; 8364.ENSXETP00000063918; -.
DR PaxDb; Q0VFL7; -.
DR DNASU; 779659; -.
DR GeneID; 779659; -.
DR KEGG; xtr:779659; -.
DR CTD; 138046; -.
DR Xenbase; XB-GENE-5767075; ralyl.
DR eggNOG; KOG0118; Eukaryota.
DR HOGENOM; CLU_079090_1_1_1; -.
DR InParanoid; Q0VFL7; -.
DR OMA; DEDCSNE; -.
DR OrthoDB; 1333811at2759; -.
DR TreeFam; TF330974; -.
DR Proteomes; UP000008143; Chromosome 6.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR CDD; cd12605; RRM_RALYL; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR017347; hnRNP_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR034504; RALYL_RRM.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 1.
DR PIRSF; PIRSF037992; hnRNP-C_Raly; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome; RNA-binding.
FT CHAIN 1..291
FT /note="RNA-binding Raly-like protein"
FT /id="PRO_0000299527"
FT DOMAIN 21..92
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 152..185
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 216..291
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 182..219
FT /evidence="ECO:0000255"
FT COMPBIAS 169..185
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 216..260
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 261..275
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 276..291
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 291 AA; 32174 MW; EC1B910889B30453 CRC64;
MTGKTQTSNV TNKNDPKSIN SRVFIGNLNT GIVKKADIEA IFAKYGKIVG CSVHKGYAFV
QYISERHARA AVTGENSRII GGQPLDINMA GEPKPYRPKL GTKRPLSTLY SAYDFDYDYY
RDDFYNRLFD YGHGRVPPPP RAAIPLKRPR MSVPTTRRGK GVFSLKGGSR SASGGSSSSG
SKLKSDELQT IKKELTQIKT KIDSLLGRLE KIEKQQKAEA GAQKKQTEDH TDSVQEECKS
ETADNSTEEH IEGGHDADGE EMTDGIEEDF DEDGSNELME NHISDIEDTS N