RAPK_STRRN
ID RAPK_STRRN Reviewed; 334 AA.
AC Q54305; A0A0A0NW69;
DT 17-FEB-2016, integrated into UniProtKB/Swiss-Prot.
DT 23-MAY-2018, sequence version 2.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=Chorismatase {ECO:0000303|PubMed:21383123};
DE EC=3.3.2.13 {ECO:0000250|UniProtKB:Q9KID9};
GN Name=rapK; ORFNames=M271_40655 {ECO:0000312|EMBL:AGP59510.1};
OS Streptomyces rapamycinicus (strain ATCC 29253 / DSM 41530 / NRRL 5491 /
OS AYB-994) (Streptomyces hygroscopicus (strain ATCC 29253)).
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces; Streptomyces violaceusniger group.
OX NCBI_TaxID=1343740;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 29253 / DSM 41530 / NRRL 5491 / AYB-994;
RX PubMed=7644502; DOI=10.1073/pnas.92.17.7839;
RA Schwecke T., Aparicio J.F., Molnar I., Koenig A., Khaw L.E., Haydock S.F.,
RA Oliynyk M., Caffrey P., Cortes J., Lester J.B., Boehm G.A., Staunton J.,
RA Leadlay P.F.;
RT "The biosynthetic gene cluster for the polyketide immunosuppressant
RT rapamycin.";
RL Proc. Natl. Acad. Sci. U.S.A. 92:7839-7843(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29253 / DSM 41530 / NRRL 5491 / AYB-994;
RX PubMed=23929477; DOI=10.1128/genomea.00581-13;
RA Baranasic D., Gacesa R., Starcevic A., Zucko J., Blazic M., Horvat M.,
RA Gjuracic K., Fujs S., Hranueli D., Kosec G., Cullum J., Petkovic H.;
RT "Draft genome sequence of Streptomyces rapamycinicus strain NRRL 5491, the
RT producer of the immunosuppressant rapamycin.";
RL Genome Announc. 1:E00581-E00581(2013).
RN [3]
RP FUNCTION, CATALYTIC ACTIVITY, AND DISRUPTION PHENOTYPE.
RX PubMed=21383123; DOI=10.1073/pnas.1015773108;
RA Andexer J.N., Kendrew S.G., Nur-e-Alam M., Lazos O., Foster T.A.,
RA Zimmermann A.S., Warneck T.D., Suthar D., Coates N.J., Koehn F.E.,
RA Skotnicki J.S., Carter G.T., Gregory M.A., Martin C.J., Moss S.J.,
RA Leadlay P.F., Wilkinson B.;
RT "Biosynthesis of the immunosuppressants FK506, FK520, and rapamycin
RT involves a previously undescribed family of enzymes acting on chorismate.";
RL Proc. Natl. Acad. Sci. U.S.A. 108:4776-4781(2011).
CC -!- FUNCTION: Involved in the biosynthesis of the macrocyclic amino acid-
CC linked polyketides rapamycin which is a potent immunosuppressant that
CC prevents T-cell proliferation through initial binding to the
CC immunophilin FKBP12. Catalyzes the hydrolysis of chorismate via a 1,4-
CC conjugate elimination of water to yield (4R,5R)-4,5-dihydroxycyclohexa-
CC 1,5-dienecarboxylic acid (DCDC). {ECO:0000269|PubMed:21383123}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=chorismate + H2O = (3R,4R)-3,4-dihydroxy-3,4-dihydrobenzoate +
CC pyruvate; Xref=Rhea:RHEA:38319, ChEBI:CHEBI:15361, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:29748, ChEBI:CHEBI:75717; EC=3.3.2.13;
CC Evidence={ECO:0000250|UniProtKB:Q9KID9};
CC -!- SUBUNIT: Monomer. {ECO:0000250|UniProtKB:Q9KID9}.
CC -!- DISRUPTION PHENOTYPE: Cells lacking this gene are unable to produce
CC rapamycin. {ECO:0000269|PubMed:21383123}.
CC -!- SIMILARITY: Belongs to the FkbO/Hyg5 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA60468.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
CC Sequence=CAA60468.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; X86780; CAA60468.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP006567; AGP59510.1; -; Genomic_DNA.
DR PIR; T30234; T30234.
DR AlphaFoldDB; Q54305; -.
DR SMR; Q54305; -.
DR STRING; 1343740.M271_40655; -.
DR KEGG; src:M271_40655; -.
DR PATRIC; fig|1343740.8.peg.6274; -.
DR eggNOG; COG0251; Bacteria.
DR HOGENOM; CLU_060951_0_0_11; -.
DR GO; GO:0016803; F:ether hydrolase activity; IDA:UniProtKB.
DR Gene3D; 3.30.1330.40; -; 1.
DR InterPro; IPR031038; Chori_FkbO_Hyg5.
DR InterPro; IPR035959; RutC-like_sf.
DR SUPFAM; SSF55298; SSF55298; 1.
DR TIGRFAMs; TIGR04444; chori_FkbO_Hyg5; 1.
PE 1: Evidence at protein level;
KW Hydrolase.
FT CHAIN 1..334
FT /note="Chorismatase"
FT /id="PRO_0000435463"
FT ACT_SITE 328
FT /note="Proton acceptor"
FT /evidence="ECO:0000250|UniProtKB:Q9KID9"
FT BINDING 143
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9KID9"
FT BINDING 150
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9KID9"
FT BINDING 203
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9KID9"
FT BINDING 216
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:Q9KID9"
FT CONFLICT 73..74
FT /note="GS -> SR (in Ref. 1; CAA60468)"
FT CONFLICT 175..176
FT /note="GG -> AR (in Ref. 1; CAA60468)"
FT CONFLICT 216..227
FT /note="RATWLSPPGADD -> GHLALAAGG (in Ref. 1; CAA60468)"
FT CONFLICT 241
FT /note="H -> Q (in Ref. 1; CAA60468)"
SQ SEQUENCE 334 AA; 35793 MW; ACDA374FD96306D6 CRC64;
MTPPVTAPYC RFEKLGASDL DGDETLLGVI EHRTGHTGVS LAEGCPRTAV HTTTREDESF
AEAWHAEGPK ESGSHDGVAW ARTPDYLFGV ARVPEGGRYA AGTAAVYTGI FDLIGTLGYP
SLARTWNYVS GINTPNADGL EVYRDFCVGR AEALDARGID PATMPAATGI GAHGGGITCY
FIAARAGDRV NMENPAVLTA HRYPQRYGPR PPVFSRATWL SPPGADDGRL FVSATAGIVG
HETVHHGDVA AQCEVSLENI ARVIGAENLG RHGLRRGYAL ADVDHLKVYV RHREDISTVR
RICAERLSRE ATVAVLHTDI ARTDLLVEIE GVVA