RARD_ECOLI
ID RARD_ECOLI Reviewed; 296 AA.
AC P27844; Q2M8C4;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 2.
DT 03-AUG-2022, entry version 148.
DE RecName: Full=Protein RarD;
GN Name=rarD; OrderedLocusNames=b3819, JW5589;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RA Ohmori H.;
RL Submitted (JAN-1993) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=1379743; DOI=10.1126/science.1379743;
RA Daniels D.L., Plunkett G. III, Burland V.D., Blattner F.R.;
RT "Analysis of the Escherichia coli genome: DNA sequence of the region from
RT 84.5 to 86.5 minutes.";
RL Science 257:771-778(1992).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP SEQUENCE REVISION.
RX PubMed=16397293; DOI=10.1093/nar/gkj405;
RA Riley M., Abe T., Arnaud M.B., Berlyn M.K.B., Blattner F.R.,
RA Chaudhuri R.R., Glasner J.D., Horiuchi T., Keseler I.M., Kosuge T.,
RA Mori H., Perna N.T., Plunkett G. III, Rudd K.E., Serres M.H., Thomas G.H.,
RA Thomson N.R., Wishart D., Wanner B.L.;
RT "Escherichia coli K-12: a cooperatively developed annotation snapshot
RT -- 2005.";
RL Nucleic Acids Res. 34:1-9(2006).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [6]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the EamA transporter family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; L02122; AAD15041.1; -; Genomic_DNA.
DR EMBL; M87049; AAA67615.1; -; Genomic_DNA.
DR EMBL; U00096; AAT48220.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE77482.1; -; Genomic_DNA.
DR PIR; S30709; S30709.
DR PIR; S30746; S30746.
DR RefSeq; WP_000339104.1; NZ_STEB01000021.1.
DR RefSeq; YP_026262.1; NC_000913.3.
DR AlphaFoldDB; P27844; -.
DR SMR; P27844; -.
DR BioGRID; 4261790; 13.
DR IntAct; P27844; 1.
DR STRING; 511145.b3819; -.
DR TCDB; 2.A.7.7.2; the drug/metabolite transporter (dmt) superfamily.
DR PaxDb; P27844; -.
DR PRIDE; P27844; -.
DR EnsemblBacteria; AAT48220; AAT48220; b3819.
DR EnsemblBacteria; BAE77482; BAE77482; BAE77482.
DR GeneID; 948330; -.
DR KEGG; ecj:JW5589; -.
DR KEGG; eco:b3819; -.
DR PATRIC; fig|1411691.4.peg.2888; -.
DR EchoBASE; EB1434; -.
DR eggNOG; COG2962; Bacteria.
DR HOGENOM; CLU_054508_1_0_6; -.
DR InParanoid; P27844; -.
DR OMA; HRMVWSL; -.
DR PhylomeDB; P27844; -.
DR BioCyc; EcoCyc:EG11466-MON; -.
DR PRO; PR:P27844; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IDA:EcoCyc.
DR GO; GO:0005887; C:integral component of plasma membrane; IEA:InterPro.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR000620; EamA_dom.
DR InterPro; IPR004626; RarD.
DR PANTHER; PTHR22911:SF114; PTHR22911:SF114; 1.
DR Pfam; PF00892; EamA; 2.
DR TIGRFAMs; TIGR00688; rarD; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..296
FT /note="Protein RarD"
FT /id="PRO_0000108152"
FT TOPO_DOM 1..11
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 12..34
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 35..37
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 38..60
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 61..72
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 73..95
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 96..99
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 100..122
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 123..128
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 129..146
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 147..149
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 150..167
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 168..179
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 180..197
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 198..211
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 212..234
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 235..238
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 239..261
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 262..270
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 271..290
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 291..296
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 18..145
FT /note="EamA"
FT CONFLICT 102
FT /note="A -> R (in Ref. 2; AAA67615)"
FT /evidence="ECO:0000305"
FT CONFLICT 123..124
FT /note="ER -> DG (in Ref. 2; AAA67615)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 296 AA; 33283 MW; E4E462C1E154912D CRC64;
MDAKQTRQGV LLALAAYFIW GIAPAYFKLI YYVPADEILT HRVIWSFFFM VVLMSICRQW
SYLKTLIQTP QKIFMLAVSA VLIGGNWLLF IWAVNNHHML EASLGYFINP LVNIVLGMIF
LGERFRRMQW LAVILAICGV LVQLWTFGSL PIIALGLAFS FAFYGLVRKK IAVEAQTGML
IETMWLLPVA AIYLFAIADS STSHMGQNPM SLNLLLIAAG IVTTVPLLCF TAAATRLRLS
TLGFFQYIGP TLMFLLAVTF YGEKPGADKM VTFAFIWVAL AIFVMDAIYT QRRTSK