RASEF_XENTR
ID RASEF_XENTR Reviewed; 722 AA.
AC Q08CX1;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 31-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Ras and EF-hand domain-containing protein;
GN Name=rasef;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=N6; TISSUE=Oviduct;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds predominantly GDP, and also GTP.
CC {ECO:0000250|UniProtKB:Q8IZ41}.
CC -!- SUBUNIT: Homodimer. {ECO:0000250|UniProtKB:Q8IZ41}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, perinuclear region
CC {ECO:0000250|UniProtKB:Q8IZ41}.
CC -!- SIMILARITY: Belongs to the small GTPase superfamily. Rab family.
CC {ECO:0000305}.
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DR EMBL; BC124049; AAI24050.1; -; mRNA.
DR RefSeq; NP_001072877.1; NM_001079409.1.
DR AlphaFoldDB; Q08CX1; -.
DR SMR; Q08CX1; -.
DR STRING; 8364.ENSXETP00000036560; -.
DR PaxDb; Q08CX1; -.
DR Ensembl; ENSXETT00000036560; ENSXETP00000036560; ENSXETG00000016758.
DR GeneID; 780339; -.
DR KEGG; xtr:780339; -.
DR CTD; 158158; -.
DR Xenbase; XB-GENE-1002559; rasef.
DR eggNOG; KOG0078; Eukaryota.
DR HOGENOM; CLU_023178_1_0_1; -.
DR InParanoid; Q08CX1; -.
DR OMA; PKFTGHS; -.
DR OrthoDB; 1184845at2759; -.
DR PhylomeDB; Q08CX1; -.
DR TreeFam; TF313106; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000016758; Expressed in brain and 4 other tissues.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0048471; C:perinuclear region of cytoplasm; IBA:GO_Central.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0019003; F:GDP binding; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IBA:GO_Central.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR CDD; cd00051; EFh; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR011992; EF-hand-dom_pair.
DR InterPro; IPR002048; EF_hand_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR001806; Small_GTPase.
DR Pfam; PF13499; EF-hand_7; 1.
DR Pfam; PF00071; Ras; 1.
DR SMART; SM00174; RHO; 1.
DR SUPFAM; SSF47473; SSF47473; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
DR PROSITE; PS50222; EF_HAND_2; 2.
DR PROSITE; PS51419; RAB; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Cytoplasm; GTP-binding; Nucleotide-binding;
KW Reference proteome; Repeat.
FT CHAIN 1..722
FT /note="Ras and EF-hand domain-containing protein"
FT /id="PRO_0000299580"
FT DOMAIN 5..39
FT /note="EF-hand 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00448"
FT DOMAIN 39..74
FT /note="EF-hand 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00448"
FT REGION 75..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 355..384
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 439..491
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 156..335
FT /evidence="ECO:0000255"
FT COMPBIAS 355..381
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 477..491
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 532..537
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250|UniProtKB:Q8IZ41"
FT BINDING 635..638
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250|UniProtKB:Q8IZ41"
FT BINDING 672..673
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000250|UniProtKB:Q8IZ41"
SQ SEQUENCE 722 AA; 81821 MW; 286013A57B8C688C CRC64;
MEDKDELSRL RALFHTFDSK SSGRLEKGQF SALCAELKVS PSEAEDIFAR LDSDKDSCIT
FEDFAMGFRG ARGLHMPEGK KDVEQGEPPK SPSTPDKEEK PEETSSPAWE DFQRRLADEV
NYIPRREQAS ILYQNINIVE PLLIQQYEHV IRNFVREIRL QSTEMENLAI AVKRAQDKAA
IQLSELEEEM DQRIQAVEKR VKKEEKRKSE EALNDLKRQH ESEVAELQVT IKKLKKLEEQ
SKNINLKEDV AVLRRRLHDL TMENQKLRKD LLEAQTSISF LQSELDALKS DYADQSLSSE
RDMDIIRGFT DERENLARQI EILQTANRKL HDSNDGLRSA LENSLMKYNR SLRTINTSPG
STISRNSPKL TRCTSPYDRS PRSSYLDEDY DSLAVCDPMQ RMNCEVDSLP ESCIDSGLST
LRDSNEYDSE AEYRPPRIFH RSRFPHENYG GDASDTDVPE IRDEESYAPD NGGNLDWKPS
NPVSRSSSGA SSSRKCISAL SANVTSAETV DKVHKYTHAE KAYKIVLAGD AAVGKSSFLM
RLCKNEFRGN TSATLGVDFQ MKTLVVDGEP TILQLWDTAG QERFRSIAKS YFRRADGVLL
LYDVTCEKSF LNVREWIDMI EDATSEAIPI MMVGNKADLR QLMAEQGHIC VSTNYGEKLS
RTYGALFCET SAKEGSNIVE AVLHLAREVR KRCDNEDDRG SVTNLSAAIS KKPAQMKNCC
NV