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RAVL3_ARATH
ID   RAVL3_ARATH             Reviewed;         352 AA.
AC   Q9C688;
DT   12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2001, sequence version 1.
DT   03-AUG-2022, entry version 134.
DE   RecName: Full=AP2/ERF and B3 domain-containing transcription factor At1g51120;
DE   AltName: Full=RAV1-like ethylene-responsive transcription factor At1g51120;
GN   OrderedLocusNames=At1g51120; ORFNames=F23H24.5;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RA   Pan Y., Gong W., Liu D., Fu Q., Mei W.-Q., Song W.-Q., Ma L.-G., Luo J.-C.,
RA   Deng X.-W., Zhu Y.-X.;
RT   "Molecular cloning, expression, phylogenetic and functional
RT   characterization of the Arabidopsis AP2/EREBP transcription factor
RT   family.";
RL   Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=16407444; DOI=10.1104/pp.105.073783;
RA   Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT   "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL   Plant Physiol. 140:411-432(2006).
RN   [5]
RP   GENE FAMILY.
RX   PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA   Swaminathan K., Peterson K., Jack T.;
RT   "The plant B3 superfamily.";
RL   Trends Plant Sci. 13:647-655(2008).
CC   -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC       GCC-box pathogenesis-related promoter element. May be involved in the
CC       regulation of gene expression by stress factors and by components of
CC       stress signal transduction pathways (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. RAV
CC       subfamily. {ECO:0000305}.
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DR   EMBL; AY560883; AAT44950.1; -; mRNA.
DR   EMBL; AC079828; AAG50531.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE32624.1; -; Genomic_DNA.
DR   PIR; F96548; F96548.
DR   RefSeq; NP_175524.1; NM_103991.1.
DR   AlphaFoldDB; Q9C688; -.
DR   SMR; Q9C688; -.
DR   BioGRID; 26760; 15.
DR   IntAct; Q9C688; 7.
DR   STRING; 3702.AT1G51120.1; -.
DR   PaxDb; Q9C688; -.
DR   PRIDE; Q9C688; -.
DR   ProteomicsDB; 236989; -.
DR   DNASU; 841535; -.
DR   EnsemblPlants; AT1G51120.1; AT1G51120.1; AT1G51120.
DR   GeneID; 841535; -.
DR   Gramene; AT1G51120.1; AT1G51120.1; AT1G51120.
DR   KEGG; ath:AT1G51120; -.
DR   Araport; AT1G51120; -.
DR   TAIR; locus:2026058; AT1G51120.
DR   eggNOG; ENOG502QQEC; Eukaryota.
DR   HOGENOM; CLU_038898_1_0_1; -.
DR   InParanoid; Q9C688; -.
DR   OMA; ICECRKE; -.
DR   OrthoDB; 942120at2759; -.
DR   PhylomeDB; Q9C688; -.
DR   PRO; PR:Q9C688; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9C688; differential.
DR   Genevisible; Q9C688; AT.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:UniProtKB-KW.
DR   CDD; cd00018; AP2; 1.
DR   CDD; cd10017; B3_DNA; 1.
DR   Gene3D; 2.40.330.10; -; 1.
DR   Gene3D; 3.30.730.10; -; 1.
DR   InterPro; IPR001471; AP2/ERF_dom.
DR   InterPro; IPR036955; AP2/ERF_dom_sf.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR016177; DNA-bd_dom_sf.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   InterPro; IPR044800; LEC2-like.
DR   PANTHER; PTHR31140; PTHR31140; 1.
DR   Pfam; PF00847; AP2; 1.
DR   Pfam; PF02362; B3; 1.
DR   SMART; SM00380; AP2; 1.
DR   SMART; SM01019; B3; 1.
DR   SUPFAM; SSF101936; SSF101936; 1.
DR   SUPFAM; SSF54171; SSF54171; 1.
DR   PROSITE; PS51032; AP2_ERF; 1.
DR   PROSITE; PS50863; B3; 1.
PE   2: Evidence at transcript level;
KW   Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW   Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..352
FT                   /note="AP2/ERF and B3 domain-containing transcription
FT                   factor At1g51120"
FT                   /id="PRO_0000290435"
FT   DNA_BIND        46..103
FT                   /note="AP2/ERF"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT   DNA_BIND        178..297
FT                   /note="TF-B3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   REGION          1..20
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   352 AA;  40307 MW;  50C7B0ED821EA11B CRC64;
     MDEMSNVAKT TTETSGLTDS VLSLTKRMKP TEVTTTTKPA LSNTTKFKGV VQQQNGHWGA
     QIYADHRRIW LGTFKSAHEA AAAYDSASIK LRSFDANSHR NFPWSDFTLH EPDFQECYTT
     EAVLNMIRDG SYQHKFRDFL RIRSQIVANI NIVGSKQVLG GGEGGQESNK CFSCTQLFQK
     ELTPSDVGKL NRLVIPKKYA VKYMPFISDD QSEKETSEGV EDVEVVFYDR AMRQWKFRYC
     YWRSSQSFVF TRGWNGFVKE KNLKEKDIIV FYTCDVPNNV KTLEGQSKTF LMIDVHHFSG
     NGFVVPEEVN KTVHEISDEE MKTETLFTSK VEEETKSEEK KGGFMLFGVR IQ
 
 
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