RBBP7_DANRE
ID RBBP7_DANRE Reviewed; 426 AA.
AC Q7ZTY4; Q6NWL5;
DT 07-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=Histone-binding protein RBBP7;
DE AltName: Full=Retinoblastoma-binding protein 7;
DE Short=RBBP-7;
GN Name=rbbp7; Synonyms=rbb4l;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Core histone-binding subunit that may target chromatin
CC remodeling factors, histone acetyltransferases and histone deacetylases
CC to their histone substrates in a manner that is regulated by
CC nucleosomal DNA. {ECO:0000250}.
CC -!- SUBUNIT: Binds directly to helix 1 of the histone fold of histone H4, a
CC region that is not accessible when H4 is in chromatin. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH67546.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; BC052110; AAH52110.1; -; mRNA.
DR EMBL; BC067546; AAH67546.1; ALT_FRAME; mRNA.
DR RefSeq; NP_997775.1; NM_212610.1.
DR AlphaFoldDB; Q7ZTY4; -.
DR SMR; Q7ZTY4; -.
DR STRING; 7955.ENSDARP00000025096; -.
DR PaxDb; Q7ZTY4; -.
DR GeneID; 322129; -.
DR KEGG; dre:322129; -.
DR CTD; 322129; -.
DR ZFIN; ZDB-GENE-030131-848; rbb4l.
DR eggNOG; KOG0264; Eukaryota.
DR InParanoid; Q7ZTY4; -.
DR OrthoDB; 831322at2759; -.
DR PhylomeDB; Q7ZTY4; -.
DR Reactome; R-DRE-212300; PRC2 methylates histones and DNA.
DR Reactome; R-DRE-2559580; Oxidative Stress Induced Senescence.
DR Reactome; R-DRE-3214815; HDACs deacetylate histones.
DR Reactome; R-DRE-3214841; PKMTs methylate histone lysines.
DR Reactome; R-DRE-3214858; RMTs methylate histone arginines.
DR Reactome; R-DRE-606279; Deposition of new CENPA-containing nucleosomes at the centromere.
DR Reactome; R-DRE-6804758; Regulation of TP53 Activity through Acetylation.
DR Reactome; R-DRE-73762; RNA Polymerase I Transcription Initiation.
DR Reactome; R-DRE-8943724; Regulation of PTEN gene transcription.
DR Reactome; R-DRE-8951664; Neddylation.
DR Reactome; R-DRE-8953750; Transcriptional Regulation by E2F6.
DR PRO; PR:Q7ZTY4; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016581; C:NuRD complex; IBA:GO_Central.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0031101; P:fin regeneration; IGI:ZFIN.
DR GO; GO:0002244; P:hematopoietic progenitor cell differentiation; IMP:ZFIN.
DR GO; GO:0016575; P:histone deacetylation; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR022052; Histone-bd_RBBP4_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF12265; CAF1C_H4-bd; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Chaperone; Chromatin regulator; DNA replication; Nucleus;
KW Reference proteome; Repeat; Repressor; Transcription;
KW Transcription regulation; WD repeat.
FT CHAIN 1..426
FT /note="Histone-binding protein RBBP7"
FT /id="PRO_0000223247"
FT REPEAT 47..123
FT /note="WD 1"
FT REPEAT 129..174
FT /note="WD 2"
FT REPEAT 182..218
FT /note="WD 3"
FT REPEAT 229..270
FT /note="WD 4"
FT REPEAT 276..313
FT /note="WD 5"
FT REPEAT 319..370
FT /note="WD 6"
FT REPEAT 377..404
FT /note="WD 7"
FT CONFLICT 83
FT /note="A -> V (in Ref. 1; AAH67546)"
FT /evidence="ECO:0000305"
FT CONFLICT 151
FT /note="A -> V (in Ref. 1; AAH67546)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 426 AA; 47752 MW; 4ACBD320FBB6DA90 CRC64;
MADKEVYDDA VEERVINEEY KIWKKNTPFL YDLVMTHALE WPSLTVQWLP DVNRPEGKDY
VVHRLVLGTH TSDEQNHLVI ASAQIPNDDA QFDASHYDSE KGAEFGGFGS VSGKIEIEIK
INHEGEVNRA RYMPQNPCII ATKTPTSDVL AFDYTKHPSK PDPSGDCSPD LRLRGHQKEG
YGLSWNPNLS GNLLSASDDH TICLWDISGA PKEGKIVDAK TIFTGHTAVV EDVSWHLLHE
SLFGSVADDQ KLMIWDTRSN NTSKPSHSVD AHTAEVNCLS FNPYSEFILA TGSADKTVAL
WDLRNLKLKL HSFESHKDEI FQVQWSPHNE TILASSGTDR RLNVWDLSKI GEEQSAEDAE
DGPPELLFIH GGHTAKISDF SWNPNEPWVI CSVSEDNIMQ VWQMAENIYN DEEPDTPASE
LEGQAS