RBBP7_XENTR
ID RBBP7_XENTR Reviewed; 425 AA.
AC Q6P315;
DT 07-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Histone-binding protein RBBP7;
DE AltName: Full=Retinoblastoma-binding protein 7;
DE Short=RBBP-7;
GN Name=rbbp7;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Core histone-binding subunit that may target chromatin
CC remodeling factors, histone acetyltransferases and histone deacetylases
CC to their histone substrates in a manner that is regulated by
CC nucleosomal DNA. {ECO:0000250}.
CC -!- SUBUNIT: Binds directly to helix 1 of the histone fold of histone H4, a
CC region that is not accessible when H4 is in chromatin. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
CC {ECO:0000305}.
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DR EMBL; BC064219; AAH64219.1; -; mRNA.
DR RefSeq; NP_989285.1; NM_203954.1.
DR AlphaFoldDB; Q6P315; -.
DR SMR; Q6P315; -.
DR STRING; 8364.ENSXETP00000002157; -.
DR PaxDb; Q6P315; -.
DR DNASU; 394900; -.
DR Ensembl; ENSXETT00000002157; ENSXETP00000002157; ENSXETG00000026983.
DR GeneID; 394900; -.
DR KEGG; xtr:394900; -.
DR CTD; 5931; -.
DR Xenbase; XB-GENE-487909; rbbp7.
DR eggNOG; KOG0264; Eukaryota.
DR HOGENOM; CLU_020445_3_1_1; -.
DR InParanoid; Q6P315; -.
DR OMA; PITDFNW; -.
DR OrthoDB; 831322at2759; -.
DR PhylomeDB; Q6P315; -.
DR TreeFam; TF106485; -.
DR Reactome; R-XTR-212300; PRC2 methylates histones and DNA.
DR Reactome; R-XTR-2559580; Oxidative Stress Induced Senescence.
DR Reactome; R-XTR-3214815; HDACs deacetylate histones.
DR Reactome; R-XTR-3214841; PKMTs methylate histone lysines.
DR Reactome; R-XTR-3214847; HATs acetylate histones.
DR Reactome; R-XTR-3214858; RMTs methylate histone arginines.
DR Reactome; R-XTR-8943724; Regulation of PTEN gene transcription.
DR Reactome; R-XTR-8951664; Neddylation.
DR Proteomes; UP000008143; Chromosome 2.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000026983; Expressed in ovary and 18 other tissues.
DR GO; GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016581; C:NuRD complex; IBA:GO_Central.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0016575; P:histone deacetylation; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR022052; Histone-bd_RBBP4_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF12265; CAF1C_H4-bd; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 3.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Chaperone; Chromatin regulator; DNA replication; Nucleus;
KW Reference proteome; Repeat; Repressor; Transcription;
KW Transcription regulation; WD repeat.
FT CHAIN 1..425
FT /note="Histone-binding protein RBBP7"
FT /id="PRO_0000223249"
FT REPEAT 47..122
FT /note="WD 1"
FT REPEAT 128..173
FT /note="WD 2"
FT REPEAT 181..217
FT /note="WD 3"
FT REPEAT 228..269
FT /note="WD 4"
FT REPEAT 275..312
FT /note="WD 5"
FT REPEAT 318..369
FT /note="WD 6"
FT REPEAT 376..403
FT /note="WD 7"
SQ SEQUENCE 425 AA; 47759 MW; 4A3F7F0435AC4F61 CRC64;
MANKEMFEDT VEERVINEEY KIWKKNTPFL YDLVMTHALE WPSLTVQWLP DVTRPEGKDY
ALHWLVLGTH TSDEQNHLVV ARVQIPNDDA QFDASHYDSE KGEFGGFGSV SGKIETEIKI
NHEGEVNRAR YMPQNPCIIA TKTPSADVLV FDYTKHPSKP DPSGDCSPDL RLRGHQKEGY
GLSWNSNLSG HLLSASDDHT VCLWDISAGP KEGKVVDAKA IFTGHSAVVE DVAWHLLHES
LFGSVADDQK LMIWDTRSNT TSKPSHSVDA HTAEVNCLSF NPYSEFILAT GSADKTVALW
DLRNLKLKLH SFESHKDEIF QVHWSPHNET ILASSGTDRR LNVWDLSKIG EEQSAEDAED
GPPELLFIHG GHTAKISDFS WNPNEPWVIC SVSEDNIMQI WQMAENIYND EEPDIPASEL
EAQGS