RBFA_ALISL
ID RBFA_ALISL Reviewed; 135 AA.
AC B6ENE3;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 25-MAY-2022, entry version 65.
DE RecName: Full=Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003};
GN Name=rbfA {ECO:0000255|HAMAP-Rule:MF_00003}; OrderedLocusNames=VSAL_I0599;
OS Aliivibrio salmonicida (strain LFI1238) (Vibrio salmonicida (strain
OS LFI1238)).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Aliivibrio.
OX NCBI_TaxID=316275;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LFI1238;
RX PubMed=19099551; DOI=10.1186/1471-2164-9-616;
RA Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N.,
RA Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S.,
RA Thurston S., Parkhill J., Willassen N.P., Thomson N.R.;
RT "The genome sequence of the fish pathogen Aliivibrio salmonicida strain
RT LFI1238 shows extensive evidence of gene decay.";
RL BMC Genomics 9:616-616(2008).
CC -!- FUNCTION: One of several proteins that assist in the late maturation
CC steps of the functional core of the 30S ribosomal subunit. Associates
CC with free 30S ribosomal subunits (but not with 30S subunits that are
CC part of 70S ribosomes or polysomes). Required for efficient processing
CC of 16S rRNA. May interact with the 5'-terminal helix region of 16S
CC rRNA. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SUBUNIT: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal
CC subunits or 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SIMILARITY: Belongs to the RbfA family. {ECO:0000255|HAMAP-
CC Rule:MF_00003}.
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DR EMBL; FM178379; CAQ78284.1; -; Genomic_DNA.
DR RefSeq; WP_012549407.1; NC_011312.1.
DR AlphaFoldDB; B6ENE3; -.
DR SMR; B6ENE3; -.
DR STRING; 316275.VSAL_I0599; -.
DR EnsemblBacteria; CAQ78284; CAQ78284; VSAL_I0599.
DR KEGG; vsa:VSAL_I0599; -.
DR eggNOG; COG0858; Bacteria.
DR HOGENOM; CLU_089475_5_0_6; -.
DR OMA; GDLQHCK; -.
DR OrthoDB; 1971380at2; -.
DR Proteomes; UP000001730; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030490; P:maturation of SSU-rRNA; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.300.20; -; 1.
DR HAMAP; MF_00003; RbfA; 1.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR000238; RbfA.
DR InterPro; IPR023799; RbfA_dom_sf.
DR PANTHER; PTHR33515; PTHR33515; 1.
DR Pfam; PF02033; RBFA; 1.
DR SUPFAM; SSF89919; SSF89919; 1.
DR TIGRFAMs; TIGR00082; rbfA; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Ribosome biogenesis.
FT CHAIN 1..135
FT /note="Ribosome-binding factor A"
FT /id="PRO_1000088854"
SQ SEQUENCE 135 AA; 15499 MW; 4C0C044BAD4FFDBB CRC64;
MSKEFSRAQR VSQQLQKELA VILQREVRDS RIGMVTISDV EVSRDLAYAK VFVTFFCVGE
QTPETCLAAL KEHEVPVRMM LGKRIRHRLT PEVRFTYDNT LVEGMRMSNL VSDVVNTDKR
KMAESGRTES DEGEE