ID   RBFA_ARATH              Reviewed;         215 AA.
AC   O65693; Q8H0V9;
DT   15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT   25-OCT-2005, sequence version 2.
DT   25-MAY-2022, entry version 139.
DE   RecName: Full=Probable ribosome-binding factor A, chloroplastic;
DE   Flags: Precursor;
GN   OrderedLocusNames=At4g34730; ORFNames=T4L20.310;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617198; DOI=10.1038/47134;
RA   Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA   Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA   Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA   de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA   Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA   Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA   Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA   Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA   Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA   Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA   Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA   Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA   Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA   Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA   Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA   Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA   Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA   Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA   Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA   Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA   Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA   Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA   Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA   Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA   Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA   de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA   Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA   Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA   Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA   Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA   Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA   Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA   Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA   Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA   Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA   O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA   Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA   Martienssen R., McCombie W.R.;
RT   "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL   Nature 402:769-777(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
CC   -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the RbfA family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=CAA18852.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=CAB80190.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AL023094; CAA18852.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AL161586; CAB80190.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; CP002687; AEE86416.1; -; Genomic_DNA.
DR   EMBL; CP002687; ANM66626.1; -; Genomic_DNA.
DR   EMBL; CP002687; ANM66627.1; -; Genomic_DNA.
DR   EMBL; BT002011; AAN72022.1; -; mRNA.
DR   EMBL; BT006250; AAP13358.1; -; mRNA.
DR   PIR; T05293; T05293.
DR   RefSeq; NP_001328511.1; NM_001342300.1.
DR   RefSeq; NP_001328512.1; NM_001342301.1.
DR   RefSeq; NP_195199.2; NM_119639.3.
DR   AlphaFoldDB; O65693; -.
DR   SMR; O65693; -.
DR   STRING; 3702.AT4G34730.1; -.
DR   iPTMnet; O65693; -.
DR   PaxDb; O65693; -.
DR   PRIDE; O65693; -.
DR   ProteomicsDB; 225946; -.
DR   EnsemblPlants; AT4G34730.1; AT4G34730.1; AT4G34730.
DR   EnsemblPlants; AT4G34730.2; AT4G34730.2; AT4G34730.
DR   EnsemblPlants; AT4G34730.3; AT4G34730.3; AT4G34730.
DR   GeneID; 829625; -.
DR   Gramene; AT4G34730.1; AT4G34730.1; AT4G34730.
DR   Gramene; AT4G34730.2; AT4G34730.2; AT4G34730.
DR   Gramene; AT4G34730.3; AT4G34730.3; AT4G34730.
DR   KEGG; ath:AT4G34730; -.
DR   Araport; AT4G34730; -.
DR   TAIR; locus:2139529; AT4G34730.
DR   eggNOG; KOG0232; Eukaryota.
DR   HOGENOM; CLU_089475_2_0_1; -.
DR   InParanoid; O65693; -.
DR   OMA; TIRCMAN; -.
DR   OrthoDB; 1446300at2759; -.
DR   PhylomeDB; O65693; -.
DR   PRO; PR:O65693; -.
DR   Proteomes; UP000006548; Chromosome 4.
DR   ExpressionAtlas; O65693; baseline and differential.
DR   Genevisible; O65693; AT.
DR   GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR   GO; GO:0043024; F:ribosomal small subunit binding; IBA:GO_Central.
DR   GO; GO:0042254; P:ribosome biogenesis; IMP:TAIR.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.300.20; -; 1.
DR   HAMAP; MF_00003; RbfA; 1.
DR   InterPro; IPR015946; KH_dom-like_a/b.
DR   InterPro; IPR000238; RbfA.
DR   InterPro; IPR023799; RbfA_dom_sf.
DR   InterPro; IPR020053; Ribosome-bd_factorA_CS.
DR   PANTHER; PTHR33515; PTHR33515; 1.
DR   Pfam; PF02033; RBFA; 1.
DR   SUPFAM; SSF89919; SSF89919; 1.
DR   TIGRFAMs; TIGR00082; rbfA; 1.
DR   PROSITE; PS01319; RBFA; 1.
PE   2: Evidence at transcript level;
KW   Chloroplast; Plastid; Reference proteome; rRNA processing; Transit peptide.
FT   TRANSIT         1..52
FT                   /note="Chloroplast"
FT   CHAIN           53..215
FT                   /note="Probable ribosome-binding factor A, chloroplastic"
FT                   /id="PRO_0000030225"
FT   REGION          183..210
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   215 AA;  24289 MW;  89F6402C1021C062 CRC64;
     MPNLLHTNQS HFFFLHHPPI YTVSSKTQAF HFPQSMAPVN LRTNLSVRRT VRCMANPRRV
     KMVAKQIMRE LSDMLLTDTV LQHAVLPEAA LGADRYLSSL TTISDVEVSN DLQVVKVYVS
     VFGDDRGKDV AIAGLKSKAK YVRSELGKRM KLRLTPEVRF IEDEAMERGS RVIAILDKIK
     AEKGSGEGKT EPSDSTEDDQ DWEVDDPDED IIYVK