RBFA_PELUB
ID RBFA_PELUB Reviewed; 122 AA.
AC Q4FNM8;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 30-AUG-2005, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003};
GN Name=rbfA {ECO:0000255|HAMAP-Rule:MF_00003}; OrderedLocusNames=SAR11_0390;
OS Pelagibacter ubique (strain HTCC1062).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales;
OC Pelagibacteraceae; Candidatus Pelagibacter.
OX NCBI_TaxID=335992;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HTCC1062;
RX PubMed=16109880; DOI=10.1126/science.1114057;
RA Giovannoni S.J., Tripp H.J., Givan S., Podar M., Vergin K.L., Baptista D.,
RA Bibbs L., Eads J., Richardson T.H., Noordewier M., Rappe M.S., Short J.M.,
RA Carrington J.C., Mathur E.J.;
RT "Genome streamlining in a cosmopolitan oceanic bacterium.";
RL Science 309:1242-1245(2005).
CC -!- FUNCTION: One of several proteins that assist in the late maturation
CC steps of the functional core of the 30S ribosomal subunit. Associates
CC with free 30S ribosomal subunits (but not with 30S subunits that are
CC part of 70S ribosomes or polysomes). Required for efficient processing
CC of 16S rRNA. May interact with the 5'-terminal helix region of 16S
CC rRNA. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SUBUNIT: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal
CC subunits or 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SIMILARITY: Belongs to the RbfA family. {ECO:0000255|HAMAP-
CC Rule:MF_00003}.
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DR EMBL; CP000084; AAZ21211.1; -; Genomic_DNA.
DR RefSeq; WP_011281675.1; NC_007205.1.
DR AlphaFoldDB; Q4FNM8; -.
DR SMR; Q4FNM8; -.
DR STRING; 335992.SAR11_0390; -.
DR EnsemblBacteria; AAZ21211; AAZ21211; SAR11_0390.
DR GeneID; 66294887; -.
DR KEGG; pub:SAR11_0390; -.
DR eggNOG; COG0858; Bacteria.
DR HOGENOM; CLU_089475_1_0_5; -.
DR OMA; MKYMPEL; -.
DR OrthoDB; 1971380at2; -.
DR Proteomes; UP000002528; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030490; P:maturation of SSU-rRNA; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.300.20; -; 1.
DR HAMAP; MF_00003; RbfA; 1.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR000238; RbfA.
DR InterPro; IPR023799; RbfA_dom_sf.
DR PANTHER; PTHR33515; PTHR33515; 1.
DR Pfam; PF02033; RBFA; 1.
DR SUPFAM; SSF89919; SSF89919; 1.
DR TIGRFAMs; TIGR00082; rbfA; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..122
FT /note="Ribosome-binding factor A"
FT /id="PRO_0000321237"
SQ SEQUENCE 122 AA; 13929 MW; 61A1A3E015081695 CRC64;
MADRIGKPVS QRQLRVGEMI RQSLGMIFAR NEAKVPNLET NTITVTEVKM SQDLKIAKAY
VLPLGGKDSE LVIKKLKECS FLIRKALSKK IIMKYLPKIL FAKDDSFEYA EKIENLIKQT
NK