RBFA_VARPS
ID RBFA_VARPS Reviewed; 123 AA.
AC C5CLW4;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 28-JUL-2009, sequence version 1.
DT 25-MAY-2022, entry version 63.
DE RecName: Full=Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003};
GN Name=rbfA {ECO:0000255|HAMAP-Rule:MF_00003}; OrderedLocusNames=Vapar_2749;
OS Variovorax paradoxus (strain S110).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=543728;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S110;
RX PubMed=21183664; DOI=10.1128/jb.00925-10;
RA Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G.,
RA O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C.,
RA Ovchinnikova G., Goodwin L., Han C.;
RT "Complete genome sequence of the metabolically versatile plant growth-
RT promoting endophyte, Variovorax paradoxus S110.";
RL J. Bacteriol. 193:1183-1190(2011).
CC -!- FUNCTION: One of several proteins that assist in the late maturation
CC steps of the functional core of the 30S ribosomal subunit. Associates
CC with free 30S ribosomal subunits (but not with 30S subunits that are
CC part of 70S ribosomes or polysomes). Required for efficient processing
CC of 16S rRNA. May interact with the 5'-terminal helix region of 16S
CC rRNA. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SUBUNIT: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal
CC subunits or 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00003}.
CC -!- SIMILARITY: Belongs to the RbfA family. {ECO:0000255|HAMAP-
CC Rule:MF_00003}.
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DR EMBL; CP001635; ACS19371.1; -; Genomic_DNA.
DR RefSeq; WP_012747853.1; NC_012791.1.
DR AlphaFoldDB; C5CLW4; -.
DR SMR; C5CLW4; -.
DR STRING; 543728.Vapar_2749; -.
DR EnsemblBacteria; ACS19371; ACS19371; Vapar_2749.
DR GeneID; 45057017; -.
DR KEGG; vap:Vapar_2749; -.
DR eggNOG; COG0858; Bacteria.
DR HOGENOM; CLU_089475_5_1_4; -.
DR OMA; GDLQHCK; -.
DR OrthoDB; 1971380at2; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030490; P:maturation of SSU-rRNA; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.300.20; -; 1.
DR HAMAP; MF_00003; RbfA; 1.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR000238; RbfA.
DR InterPro; IPR023799; RbfA_dom_sf.
DR PANTHER; PTHR33515; PTHR33515; 1.
DR Pfam; PF02033; RBFA; 1.
DR SUPFAM; SSF89919; SSF89919; 1.
DR TIGRFAMs; TIGR00082; rbfA; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Ribosome biogenesis.
FT CHAIN 1..123
FT /note="Ribosome-binding factor A"
FT /id="PRO_1000201657"
SQ SEQUENCE 123 AA; 13751 MW; 19CCFBD8DE67BC1B CRC64;
MPKRKAAAPN RAFKVADQIQ RDLTELIARE LKDPRVGMVT IQAVEVTPDY AHAKIYFSML
TGDVTETTEA LNQAAGFLRN GLFKRLHIHT VPTLHFLFDR TTERAADMNA LIAQAVASRS
KDD