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RBFA_VARPS
ID   RBFA_VARPS              Reviewed;         123 AA.
AC   C5CLW4;
DT   22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT   28-JUL-2009, sequence version 1.
DT   25-MAY-2022, entry version 63.
DE   RecName: Full=Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003};
GN   Name=rbfA {ECO:0000255|HAMAP-Rule:MF_00003}; OrderedLocusNames=Vapar_2749;
OS   Variovorax paradoxus (strain S110).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Variovorax.
OX   NCBI_TaxID=543728;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S110;
RX   PubMed=21183664; DOI=10.1128/jb.00925-10;
RA   Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G.,
RA   O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C.,
RA   Ovchinnikova G., Goodwin L., Han C.;
RT   "Complete genome sequence of the metabolically versatile plant growth-
RT   promoting endophyte, Variovorax paradoxus S110.";
RL   J. Bacteriol. 193:1183-1190(2011).
CC   -!- FUNCTION: One of several proteins that assist in the late maturation
CC       steps of the functional core of the 30S ribosomal subunit. Associates
CC       with free 30S ribosomal subunits (but not with 30S subunits that are
CC       part of 70S ribosomes or polysomes). Required for efficient processing
CC       of 16S rRNA. May interact with the 5'-terminal helix region of 16S
CC       rRNA. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC   -!- SUBUNIT: Monomer. Binds 30S ribosomal subunits, but not 50S ribosomal
CC       subunits or 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00003}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00003}.
CC   -!- SIMILARITY: Belongs to the RbfA family. {ECO:0000255|HAMAP-
CC       Rule:MF_00003}.
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DR   EMBL; CP001635; ACS19371.1; -; Genomic_DNA.
DR   RefSeq; WP_012747853.1; NC_012791.1.
DR   AlphaFoldDB; C5CLW4; -.
DR   SMR; C5CLW4; -.
DR   STRING; 543728.Vapar_2749; -.
DR   EnsemblBacteria; ACS19371; ACS19371; Vapar_2749.
DR   GeneID; 45057017; -.
DR   KEGG; vap:Vapar_2749; -.
DR   eggNOG; COG0858; Bacteria.
DR   HOGENOM; CLU_089475_5_1_4; -.
DR   OMA; GDLQHCK; -.
DR   OrthoDB; 1971380at2; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0030490; P:maturation of SSU-rRNA; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.300.20; -; 1.
DR   HAMAP; MF_00003; RbfA; 1.
DR   InterPro; IPR015946; KH_dom-like_a/b.
DR   InterPro; IPR000238; RbfA.
DR   InterPro; IPR023799; RbfA_dom_sf.
DR   PANTHER; PTHR33515; PTHR33515; 1.
DR   Pfam; PF02033; RBFA; 1.
DR   SUPFAM; SSF89919; SSF89919; 1.
DR   TIGRFAMs; TIGR00082; rbfA; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Ribosome biogenesis.
FT   CHAIN           1..123
FT                   /note="Ribosome-binding factor A"
FT                   /id="PRO_1000201657"
SQ   SEQUENCE   123 AA;  13751 MW;  19CCFBD8DE67BC1B CRC64;
     MPKRKAAAPN RAFKVADQIQ RDLTELIARE LKDPRVGMVT IQAVEVTPDY AHAKIYFSML
     TGDVTETTEA LNQAAGFLRN GLFKRLHIHT VPTLHFLFDR TTERAADMNA LIAQAVASRS
     KDD
 
 
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