RBM34_RAT
ID RBM34_RAT Reviewed; 428 AA.
AC Q5M9F1;
DT 27-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=RNA-binding protein 34;
DE AltName: Full=RNA-binding motif protein 34;
GN Name=Rbm34;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [2]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=22673903; DOI=10.1038/ncomms1871;
RA Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C.,
RA Olsen J.V.;
RT "Quantitative maps of protein phosphorylation sites across 14 different rat
RT organs and tissues.";
RL Nat. Commun. 3:876-876(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:P42696}.
CC -!- SIMILARITY: Belongs to the RRM RBM34 family. {ECO:0000305}.
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DR EMBL; BC087155; AAH87155.1; -; mRNA.
DR RefSeq; NP_001014037.1; NM_001014015.1.
DR AlphaFoldDB; Q5M9F1; -.
DR SMR; Q5M9F1; -.
DR STRING; 10116.ENSRNOP00000027145; -.
DR iPTMnet; Q5M9F1; -.
DR PhosphoSitePlus; Q5M9F1; -.
DR PaxDb; Q5M9F1; -.
DR PRIDE; Q5M9F1; -.
DR Ensembl; ENSRNOT00000027145; ENSRNOP00000027145; ENSRNOG00000020004.
DR GeneID; 307956; -.
DR KEGG; rno:307956; -.
DR UCSC; RGD:1310161; rat.
DR CTD; 23029; -.
DR RGD; 1310161; Rbm34.
DR eggNOG; KOG0118; Eukaryota.
DR GeneTree; ENSGT00390000011249; -.
DR HOGENOM; CLU_050628_0_0_1; -.
DR InParanoid; Q5M9F1; -.
DR OMA; VDHTVVN; -.
DR OrthoDB; 1176212at2759; -.
DR PhylomeDB; Q5M9F1; -.
DR TreeFam; TF313083; -.
DR PRO; PR:Q5M9F1; -.
DR Proteomes; UP000002494; Chromosome 19.
DR Bgee; ENSRNOG00000020004; Expressed in thymus and 20 other tissues.
DR Genevisible; Q5M9F1; RN.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd12394; RRM1_RBM34; 1.
DR CDD; cd12395; RRM2_RBM34; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR034220; RBM34_RRM1.
DR InterPro; IPR034221; RBM34_RRM2.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; SSF54928; 2.
DR PROSITE; PS50102; RRM; 2.
PE 1: Evidence at protein level;
KW Acetylation; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome;
KW Repeat; RNA-binding; Ubl conjugation.
FT CHAIN 1..428
FT /note="RNA-binding protein 34"
FT /id="PRO_0000081792"
FT DOMAIN 183..278
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 285..362
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 1..106
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 127..152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 361..428
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..106
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 132..148
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 378..392
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..428
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 147
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:Q8C5L7"
FT MOD_RES 286
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P42696"
FT CROSSLNK 240
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P42696"
SQ SEQUENCE 428 AA; 47661 MW; ACC0C28D36B81042 CRC64;
MALRGEGRKR KKGQERRQSS EDDVGNAATD YLVGQVADSL RGGARPPGGG TGRLAALFST
PETLAPPVFV PVPQETSKKR KPDDEEETVA HIKKPALQEP ARKVKVKKLS DADKRLANRE
SALANADLEE IRQDQGQGRR RSQSRGKVTD GEALDVALSL NEDGRQRTKV PLNPEEERLK
NERTVFVGNL PVTCNKKKLK SFFKEYGQVE SVRFRSVMPA EGTLSKKLAA IKRKFHPDQK
SINAYVVFKE ERAAAKALQR NGAQIAEGFR IRVDLASETA SRDKRSVFVG NLPYRVDESA
LEEHFLDCGS IVAVRIVRNP LTGVGRGFGY VLFENTDAVH LALKLNNSEL MGRKLRVMRS
VNKEKLKQQN SNPSVKKDGS KSKQRLNFTS KEGKSHSKNA FIGEKAVLMK KKKGQKKKGQ
TKKPRKQK