RBM46_XENTR
ID RBM46_XENTR Reviewed; 534 AA.
AC Q0P4R6;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 19-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=Probable RNA-binding protein 46;
DE AltName: Full=RNA-binding motif protein 46;
GN Name=rbm46;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BC121934; AAI21935.1; -; mRNA.
DR RefSeq; NP_001072501.1; NM_001079033.1.
DR RefSeq; XP_012820846.1; XM_012965392.2.
DR AlphaFoldDB; Q0P4R6; -.
DR SMR; Q0P4R6; -.
DR STRING; 8364.ENSXETP00000050765; -.
DR DNASU; 779956; -.
DR GeneID; 779956; -.
DR KEGG; xtr:779956; -.
DR CTD; 166863; -.
DR Xenbase; XB-GENE-1011216; rbm46.
DR eggNOG; KOG0117; Eukaryota.
DR InParanoid; Q0P4R6; -.
DR OrthoDB; 1384330at2759; -.
DR Proteomes; UP000008143; Chromosome 1.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000032344; Expressed in testis and 3 other tissues.
DR ExpressionAtlas; Q0P4R6; baseline.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR CDD; cd19901; DSRM_RBM46; 1.
DR CDD; cd12492; RRM2_RBM46; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR006535; HnRNP_R/Q_splicing_fac.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR044462; RBM46_DSR.
DR InterPro; IPR034435; RBM46_RRM2.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; SSF54928; 3.
DR TIGRFAMs; TIGR01648; hnRNP-R-Q; 1.
DR PROSITE; PS50102; RRM; 3.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; RNA-binding.
FT CHAIN 1..534
FT /note="Probable RNA-binding protein 46"
FT /id="PRO_0000305318"
FT DOMAIN 61..139
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 141..223
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 236..308
FT /note="RRM 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
SQ SEQUENCE 534 AA; 60167 MW; 0515CF42CE23528F CRC64;
MEDNCTDMFN GCSKFDISIQ TQVALLALID NTGYTMVQVN GQRKFGGPPP GWEGPPPPRG
CEVFVGKIPR DMYEDKLVPL FARAGKIYEF RLMMEFSGEN RGYAFVMYTN KEEALLAIRM
LNNYEICQGK FIGVCVSLDN CRLFIGSIPQ EKRKEEILEE MKKVTEGVMD VIVYPSATDK
TKNRGFAFVM YESHRAAAMA RRKLIPGPFQ LWGHTIKVAW ASPEKEVDEE TMQKVKVLYV
RNLMMSTTEE TIKAEFNRYK PGVVERVKKI RDYAFVHFFR RDYAIAAMSV MNGRLIDGAR
IEVTLAKPVN KEAAWRQNGN GHMNANSECL LNFANKEGSQ KALDMCSNVP AYLNNPNSPT
FLEPETCTYP CIPGTKLTPI NLYSLKIHHF HSAVMHLEYF CYKNNWSFPE YYLYSTTGQD
GKMLLAYKVI LPAITGNTNS YFMPDKLCSF VEDAKELAAQ FTLMHLDYSY HPTSGKNISL
PSTAATSGTS GVLPYTPKPY SYSSYPSSPN VSLTNGGSVG KQLYVSNQAS YFSG