RBM48_RAT
ID RBM48_RAT Reviewed; 371 AA.
AC Q561R3;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2005, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=RNA-binding protein 48;
GN Name=Rbm48;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Thymus;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SIMILARITY: Belongs to the RBM48 family. {ECO:0000305}.
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DR EMBL; BC093393; AAH93393.1; -; mRNA.
DR RefSeq; NP_001019417.1; NM_001024246.1.
DR AlphaFoldDB; Q561R3; -.
DR SMR; Q561R3; -.
DR STRING; 10116.ENSRNOP00000012086; -.
DR PaxDb; Q561R3; -.
DR GeneID; 296840; -.
DR KEGG; rno:296840; -.
DR UCSC; RGD:1310794; rat.
DR CTD; 84060; -.
DR RGD; 1310794; Rbm48.
DR VEuPathDB; HostDB:ENSRNOG00000008980; -.
DR eggNOG; ENOG502QSNB; Eukaryota.
DR HOGENOM; CLU_065720_0_0_1; -.
DR InParanoid; Q561R3; -.
DR OMA; PLCYFAS; -.
DR OrthoDB; 1117000at2759; -.
DR PhylomeDB; Q561R3; -.
DR TreeFam; TF328457; -.
DR PRO; PR:Q561R3; -.
DR Proteomes; UP000002494; Chromosome 4.
DR Bgee; ENSRNOG00000008980; Expressed in thymus and 19 other tissues.
DR Genevisible; Q561R3; RN.
DR GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd12442; RRM_RBM48; 1.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR039599; RBM48.
DR InterPro; IPR034264; RBM48_RRM.
DR PANTHER; PTHR20957; PTHR20957; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; RNA-binding.
FT CHAIN 1..371
FT /note="RNA-binding protein 48"
FT /id="PRO_0000321517"
FT DOMAIN 46..124
FT /note="RRM"
FT REGION 220..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 343..371
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..247
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 371 AA; 41863 MW; F172A8CDC30365C5 CRC64;
MASSDGKPGG IFDHHVQTAV CDSRAKYREG RRPRAVKVYT INLESQYLLI QGVPAVGAMK
ELVERFALYG AIEQYNALDE YPAEDFTEVY LIKFVKLQSA RIAKKKMDEQ SFFGGLLHVC
YAPEFETVEE TRKKLEERKA YISRVTKNQD YYVTKKKPVP EQKGTKDSRQ DFHAHMPGFC
TPALNTSPKN PSENSSPCLP YSCEFPLCYF ASKSPCSPGE HTDKASDSCN SARNRGELQK
HRDHSAFPPK LQMNTYKTSV PCSSVQEAIA TSQAVGRFMP RTTQLQERKR RRDCDRELGT
FLETNISSNE VLIGPKLPGI PTVDLQDDSL NTTANLIRSK LKEVTSSVPK PPEDNGEDVC
TSHPRKQRRR I