RBP2_MEDTR
ID RBP2_MEDTR Reviewed; 252 AA.
AC G7ID19; I3SDS6;
DT 14-OCT-2015, integrated into UniProtKB/Swiss-Prot.
DT 25-JAN-2012, sequence version 1.
DT 25-MAY-2022, entry version 47.
DE RecName: Full=RNA-binding protein 2 {ECO:0000305};
GN Name=RBP2 {ECO:0000305};
GN OrderedLocusNames=MTR_1g099190 {ECO:0000312|EnsemblPlants:AES62393};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880 {ECO:0000312|Proteomes:UP000002051};
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Krishnakumar V., Cheung F., Xiao Y., Chan A., Moskal W.A., Town C.D.;
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17;
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B.,
RA Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H.,
RA Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F.,
RA De Mita S., Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K.,
RA Murray J.D., Naoumkina M.A., Rosen B., Silverstein K.A.T., Tang H.,
RA Rombauts S., Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M.,
RA Bellec A., Berger A., Berges H., Bidwell S., Bisseling T., Choisne N.,
RA Couloux A., Denny R., Deshpande S., Dai X., Doyle J.J., Dudez A.-M.,
RA Farmer A.D., Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S.,
RA Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., Humphray S.J.,
RA Jeong D.-H., Jing Y., Jocker A., Kenton S.M., Kim D.-J., Klee K., Lai H.,
RA Lang C., Lin S., Macmil S.L., Magdelenat G., Matthews L., McCorrison J.,
RA Monaghan E.L., Mun J.-H., Najar F.Z., Nicholson C., Noirot C.,
RA O'Bleness M., Paule C.R., Poulain J., Prion F., Qin B., Qu C., Retzel E.F.,
RA Riddle C., Sallet E., Samain S., Samson N., Sanders I., Saurat O.,
RA Scarpelli C., Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R.,
RA Sims S., Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.-B.,
RA Wang K., Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D.,
RA White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F.,
RA Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D.,
RA Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17;
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
CC -!- FUNCTION: Probable RNA-binding protein. {ECO:0000250|UniProtKB:Q8H0P8}.
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DR EMBL; BT138623; AFK38418.1; -; mRNA.
DR EMBL; CM001217; AES62393.1; -; Genomic_DNA.
DR RefSeq; XP_003592142.1; XM_003592094.2.
DR AlphaFoldDB; G7ID19; -.
DR SMR; G7ID19; -.
DR EnsemblPlants; AES62393; AES62393; MTR_1g099190.
DR GeneID; 11424149; -.
DR Gramene; AES62393; AES62393; MTR_1g099190.
DR KEGG; mtr:MTR_1g099190; -.
DR eggNOG; ENOG502QVUV; Eukaryota.
DR HOGENOM; CLU_078642_1_0_1; -.
DR OMA; AMDEFMM; -.
DR OrthoDB; 1252072at2759; -.
DR Proteomes; UP000002051; Chromosome 1.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; RNA-binding.
FT CHAIN 1..252
FT /note="RNA-binding protein 2"
FT /id="PRO_0000434145"
FT DOMAIN 152..238
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 232..252
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 125
FT /note="V -> A (in Ref. 1; AFK38418)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 252 AA; 26852 MW; 493253DFAF510944 CRC64;
MADGFWNRQQ QHLPPPGGML KRPRTEYDTA PSGVTSGNEV HNYIAQNNGH QMLNDTKILG
SAYDRFLQSA GLTSFNSGEA SVIGGVGFAR GVGELPGHSL GDPSAMGHLS GVGGGPDLSR
NGRDVNFGGQ LPIDAVSRPG PETIPLPRDA SSTLYVEGLP SDSTKREVAH IFRPFVGYRE
VRLVAKESKH RGGDPLILCF VDFANPACAA TALSALQGYK VDEINPESSY LRLQFSRSPG
RRSGGPGPRG KR