RBP47_NICPL
ID RBP47_NICPL Reviewed; 428 AA.
AC Q9LEB3;
DT 22-FEB-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 74.
DE RecName: Full=Polyadenylate-binding protein RBP47;
DE Short=Poly(A)-binding protein RBP47;
DE AltName: Full=RNA-binding protein 47;
DE Short=NplRBP47;
GN Name=RBP47;
OS Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4092;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, SUBUNIT,
RP SUBCELLULAR LOCATION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11105760; DOI=10.1017/s1355838200001163;
RA Lorkovic Z.J., Wieczorek Kirk D.A., Klahre U., Hemmings-Mieszczak M.,
RA Filipowicz W.;
RT "RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins
RT interacting with poly(A)+ RNA in nuclei of plant cells.";
RL RNA 6:1610-1624(2000).
RN [2]
RP FUNCTION, AND SUBCELLULAR LOCATION.
RX PubMed=18643965; DOI=10.1111/j.1365-313x.2008.03623.x;
RA Weber C., Nover L., Fauth M.;
RT "Plant stress granules and mRNA processing bodies are distinct from heat
RT stress granules.";
RL Plant J. 56:517-530(2008).
CC -!- FUNCTION: Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein
CC binding the poly(A) tail of mRNA and probably involved in some steps of
CC pre-mRNA maturation. {ECO:0000269|PubMed:11105760,
CC ECO:0000269|PubMed:18643965}.
CC -!- SUBUNIT: Interacts with the poly(A) tail of mRNA in nucleus.
CC {ECO:0000269|PubMed:11105760}.
CC -!- SUBCELLULAR LOCATION: Nucleus. Cytoplasmic granule. Note=Relocalizes
CC from nucleus to cytoplasmic stress granules (SGs) under heat stress.
CC -!- TISSUE SPECIFICITY: Constitutively expressed in leaves, roots, and
CC stems. {ECO:0000269|PubMed:11105760}.
CC -!- SIMILARITY: Belongs to the polyadenylate-binding RBP47 family.
CC {ECO:0000305}.
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DR EMBL; AJ292768; CAC01238.1; -; mRNA.
DR AlphaFoldDB; Q9LEB3; -.
DR SMR; Q9LEB3; -.
DR GO; GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0008143; F:poly(A) binding; IDA:UniProtKB.
DR GO; GO:0034605; P:cellular response to heat; IDA:UniProtKB.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; SSF54928; 3.
DR PROSITE; PS50102; RRM; 3.
PE 1: Evidence at protein level;
KW mRNA processing; Nucleus; Repeat; RNA-binding; Stress response.
FT CHAIN 1..428
FT /note="Polyadenylate-binding protein RBP47"
FT /id="PRO_0000415765"
FT DOMAIN 84..164
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 177..256
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 295..367
FT /note="RRM 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
SQ SEQUENCE 428 AA; 47374 MW; E5579F481C40523D CRC64;
MNGGDMNQQQ QQQQQQHQQQ QQQWLAMQQY QQQWMAMQYP AAAMAMQQQM MYGQQYMPYY
QQHQQQQKMQ QSPTQIQSSS EDNKTIWIGD LQQWMDESYL HSCFSQAGEV ISVKIIRNKQ
TGQSERYGFV EFNTHAAAEK VLQSYNGTMM PNTEQPFRLN WAGFSTGEKR AETGSDFSIF
VGDLASDVTD TMLRDTFASR YPSLKGAKVV VDANTGHSKG YGFVRFGDES ERSRAMTEMN
GVYCSSRAMR IGVATPKKPS AHEQYSSQAV ILSGGYASNG AATHGSQSDG DSSNTTIFVG
GLDSEVTDEE LRQSFNQFGE VVSVKIPAGK GCGFVQFSDR SSAQEAIQKL SGAIIGKQAV
RLSWGRSPAN KQMRTDSGSQ WNGGYNGRQN YGGYGYGASQ NQDSGMYATG AAYGASSNRY
GNHQQPVS