RBSA_ECOLI
ID RBSA_ECOLI Reviewed; 501 AA.
AC P04983; Q2M867;
DT 13-AUG-1987, integrated into UniProtKB/Swiss-Prot.
DT 13-AUG-1987, sequence version 1.
DT 03-AUG-2022, entry version 180.
DE RecName: Full=Ribose import ATP-binding protein RbsA {ECO:0000255|HAMAP-Rule:MF_01716, ECO:0000305};
DE EC=7.5.2.7 {ECO:0000255|HAMAP-Rule:MF_01716, ECO:0000305|PubMed:8762140};
GN Name=rbsA {ECO:0000255|HAMAP-Rule:MF_01716, ECO:0000303|PubMed:6327617};
GN OrderedLocusNames=b3749, JW3728;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=3011793; DOI=10.1016/s0021-9258(19)57448-8;
RA Bell A.W., Buckel S.D., Groarke J.M., Hope J.N., Kingsley D.H.,
RA Hermodson M.A.;
RT "The nucleotide sequences of the rbsD, rbsA, and rbsC genes of Escherichia
RT coli K12.";
RL J. Biol. Chem. 261:7652-7658(1986).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=7686882; DOI=10.1006/geno.1993.1230;
RA Burland V.D., Plunkett G. III, Daniels D.L., Blattner F.R.;
RT "DNA sequence and analysis of 136 kilobases of the Escherichia coli genome:
RT organizational symmetry around the origin of replication.";
RL Genomics 16:551-561(1993).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP PROTEIN SEQUENCE OF 1-10, AND DISCUSSION OF SEQUENCE.
RX PubMed=3086314; DOI=10.1016/s0021-9258(19)57449-x;
RA Buckel S.D., Bell A.W., Rao J.K.M., Hermodson M.A.;
RT "An analysis of the structure of the product of the rbsA gene of
RT Escherichia coli K12.";
RL J. Biol. Chem. 261:7659-7662(1986).
RN [6]
RP PROTEIN SEQUENCE OF 1-6, FUNCTION, ATPASE ACTIVITY, BIOPHYSICOCHEMICAL
RP PROPERTIES, AND MUTAGENESIS OF LYS-43.
RX PubMed=8762140; DOI=10.1002/pro.5560050611;
RA Barroga C.F., Zhang H., Wajih N., Bouyer J.H., Hermodson M.A.;
RT "The proteins encoded by the rbs operon of Escherichia coli: I.
RT Overproduction, purification, characterization, and functional analysis of
RT RbsA.";
RL Protein Sci. 5:1093-1099(1996).
RN [7]
RP FUNCTION.
RX PubMed=6327617; DOI=10.1128/jb.158.2.674-682.1984;
RA Iida A., Harayama S., Iino T., Hazelbauer G.L.;
RT "Molecular cloning and characterization of genes required for ribose
RT transport and utilization in Escherichia coli K-12.";
RL J. Bacteriol. 158:674-682(1984).
RN [8]
RP FUNCTION, AND SUBUNIT.
RX PubMed=25533465; DOI=10.1074/jbc.m114.621573;
RA Clifton M.C., Simon M.J., Erramilli S.K., Zhang H., Zaitseva J.,
RA Hermodson M.A., Stauffacher C.V.;
RT "In vitro reassembly of the ribose ATP-binding cassette transporter reveals
RT a distinct set of transport complexes.";
RL J. Biol. Chem. 290:5555-5565(2015).
CC -!- FUNCTION: Part of the ABC transporter complex RbsABC involved in ribose
CC import. Responsible for energy coupling to the transport system.
CC {ECO:0000255|HAMAP-Rule:MF_01716, ECO:0000269|PubMed:25533465,
CC ECO:0000269|PubMed:6327617, ECO:0000269|PubMed:8762140}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + D-ribose(out) + H2O = ADP + D-ribose(in) + H(+) +
CC phosphate; Xref=Rhea:RHEA:29903, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474,
CC ChEBI:CHEBI:47013, ChEBI:CHEBI:456216; EC=7.5.2.7;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01716,
CC ECO:0000305|PubMed:8762140};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=140 uM for ATP {ECO:0000269|PubMed:8762140};
CC -!- SUBUNIT: The complex is composed of an ATP-binding protein (RbsA), two
CC transmembrane proteins (RbsC) and a solute-binding protein (RbsB).
CC {ECO:0000255|HAMAP-Rule:MF_01716, ECO:0000269|PubMed:25533465}.
CC -!- INTERACTION:
CC P04983; P16685: phnG; NbExp=3; IntAct=EBI-1132449, EBI-9126715;
CC P04983; P0AGI1: rbsC; NbExp=5; IntAct=EBI-1132449, EBI-21444614;
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC Rule:MF_01716, ECO:0000305|PubMed:25533465}; Peripheral membrane
CC protein {ECO:0000255|HAMAP-Rule:MF_01716, ECO:0000305|PubMed:25533465}.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. Ribose importer
CC (TC 3.A.1.2.1) family. {ECO:0000255|HAMAP-Rule:MF_01716}.
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DR EMBL; M13169; AAA51473.1; -; Genomic_DNA.
DR EMBL; L10328; AAA62102.1; -; Genomic_DNA.
DR EMBL; U00096; AAC76772.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE77539.1; -; Genomic_DNA.
DR PIR; B26304; B26304.
DR RefSeq; NP_418205.1; NC_000913.3.
DR RefSeq; WP_000387770.1; NZ_SSZK01000036.1.
DR AlphaFoldDB; P04983; -.
DR SMR; P04983; -.
DR BioGRID; 4263458; 77.
DR BioGRID; 852566; 10.
DR ComplexPortal; CPX-4284; RbsABC ribose ABC transporter.
DR DIP; DIP-10640N; -.
DR IntAct; P04983; 13.
DR STRING; 511145.b3749; -.
DR TCDB; 3.A.1.2.1; the atp-binding cassette (abc) superfamily.
DR jPOST; P04983; -.
DR PaxDb; P04983; -.
DR PRIDE; P04983; -.
DR EnsemblBacteria; AAC76772; AAC76772; b3749.
DR EnsemblBacteria; BAE77539; BAE77539; BAE77539.
DR GeneID; 948264; -.
DR KEGG; ecj:JW3728; -.
DR KEGG; eco:b3749; -.
DR PATRIC; fig|1411691.4.peg.2951; -.
DR EchoBASE; EB0807; -.
DR eggNOG; COG1129; Bacteria.
DR HOGENOM; CLU_000604_92_3_6; -.
DR InParanoid; P04983; -.
DR OMA; AKREIYQ; -.
DR PhylomeDB; P04983; -.
DR BioCyc; EcoCyc:RBSA-MON; -.
DR BioCyc; MetaCyc:RBSA-MON; -.
DR PRO; PR:P04983; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IDA:EcoCyc.
DR GO; GO:0055052; C:ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing; IPI:ComplexPortal.
DR GO; GO:0016020; C:membrane; IDA:ComplexPortal.
DR GO; GO:0015611; F:ABC-type D-ribose transporter activity; IEA:RHEA.
DR GO; GO:0015407; F:ABC-type monosaccharide transporter activity; IDA:EcoCyc.
DR GO; GO:0005524; F:ATP binding; ISM:EcoCyc.
DR GO; GO:0015591; F:D-ribose transmembrane transporter activity; IDA:EcoCyc.
DR GO; GO:0015752; P:D-ribose transmembrane transport; IDA:ComplexPortal.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00005; ABC_tran; 2.
DR SMART; SM00382; AAA; 2.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 1.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 1.
DR PROSITE; PS51254; RBSA; 1.
PE 1: Evidence at protein level;
KW ATP-binding; Cell inner membrane; Cell membrane; Direct protein sequencing;
KW Membrane; Nucleotide-binding; Reference proteome; Repeat; Sugar transport;
KW Translocase; Transport.
FT CHAIN 1..501
FT /note="Ribose import ATP-binding protein RbsA"
FT /id="PRO_0000092956"
FT DOMAIN 5..241
FT /note="ABC transporter 1"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01716"
FT DOMAIN 252..495
FT /note="ABC transporter 2"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01716"
FT BINDING 37..44
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01716"
FT MUTAGEN 43
FT /note="K->R: Loss of transport."
FT /evidence="ECO:0000269|PubMed:8762140"
SQ SEQUENCE 501 AA; 55042 MW; A37B5F3A910A5D19 CRC64;
MEALLQLKGI DKAFPGVKAL SGAALNVYPG RVMALVGENG AGKSTMMKVL TGIYTRDAGT
LLWLGKETTF TGPKSSQEAG IGIIHQELNL IPQLTIAENI FLGREFVNRF GKIDWKTMYA
EADKLLAKLN LRFKSDKLVG DLSIGDQQMV EIAKVLSFES KVIIMDEPTD ALTDTETESL
FRVIRELKSQ GRGIVYISHR MKEIFEICDD VTVFRDGQFI AEREVASLTE DSLIEMMVGR
KLEDQYPHLD KAPGDIRLKV DNLCGPGVND VSFTLRKGEI LGVSGLMGAG RTELMKVLYG
ALPRTSGYVT LDGHEVVTRS PQDGLANGIV YISEDRKRDG LVLGMSVKEN MSLTALRYFS
RAGGSLKHAD EQQAVSDFIR LFNVKTPSME QAIGLLSGGN QQKVAIARGL MTRPKVLILD
EPTRGVDVGA KKEIYQLINQ FKADGLSIIL VSSEMPEVLG MSDRIIVMHE GHLSGEFTRE
QATQEVLMAA AVGKLNRVNQ E