RBSA_VIBPA
ID RBSA_VIBPA Reviewed; 501 AA.
AC Q87H79;
DT 28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Ribose import ATP-binding protein RbsA {ECO:0000255|HAMAP-Rule:MF_01716};
DE EC=7.5.2.7 {ECO:0000255|HAMAP-Rule:MF_01716};
GN Name=rbsA {ECO:0000255|HAMAP-Rule:MF_01716}; OrderedLocusNames=VPA1086;
OS Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=223926;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RIMD 2210633;
RX PubMed=12620739; DOI=10.1016/s0140-6736(03)12659-1;
RA Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K.,
RA Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S.,
RA Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.;
RT "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
RT distinct from that of V. cholerae.";
RL Lancet 361:743-749(2003).
CC -!- FUNCTION: Part of the ABC transporter complex RbsABC involved in ribose
CC import. Responsible for energy coupling to the transport system.
CC {ECO:0000255|HAMAP-Rule:MF_01716}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + D-ribose(out) + H2O = ADP + D-ribose(in) + H(+) +
CC phosphate; Xref=Rhea:RHEA:29903, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:43474,
CC ChEBI:CHEBI:47013, ChEBI:CHEBI:456216; EC=7.5.2.7;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01716};
CC -!- SUBUNIT: The complex is composed of an ATP-binding protein (RbsA), two
CC transmembrane proteins (RbsC) and a solute-binding protein (RbsB).
CC {ECO:0000255|HAMAP-Rule:MF_01716}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC Rule:MF_01716}; Peripheral membrane protein {ECO:0000255|HAMAP-
CC Rule:MF_01716}.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. Ribose importer
CC (TC 3.A.1.2.1) family. {ECO:0000255|HAMAP-Rule:MF_01716}.
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DR EMBL; BA000032; BAC62429.1; -; Genomic_DNA.
DR RefSeq; NP_800596.1; NC_004605.1.
DR RefSeq; WP_005463701.1; NC_004605.1.
DR AlphaFoldDB; Q87H79; -.
DR SMR; Q87H79; -.
DR STRING; 223926.28809387; -.
DR EnsemblBacteria; BAC62429; BAC62429; BAC62429.
DR GeneID; 1191781; -.
DR KEGG; vpa:VPA1086; -.
DR PATRIC; fig|223926.6.peg.4014; -.
DR eggNOG; COG1129; Bacteria.
DR HOGENOM; CLU_000604_92_3_6; -.
DR OMA; AKREIYQ; -.
DR Proteomes; UP000002493; Chromosome 2.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015611; F:ABC-type D-ribose transporter activity; IEA:RHEA.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00005; ABC_tran; 2.
DR SMART; SM00382; AAA; 2.
DR SUPFAM; SSF52540; SSF52540; 2.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 2.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 1.
DR PROSITE; PS51254; RBSA; 1.
PE 3: Inferred from homology;
KW ATP-binding; Cell inner membrane; Cell membrane; Membrane;
KW Nucleotide-binding; Reference proteome; Repeat; Sugar transport;
KW Translocase; Transport.
FT CHAIN 1..501
FT /note="Ribose import ATP-binding protein RbsA"
FT /id="PRO_0000261117"
FT DOMAIN 6..242
FT /note="ABC transporter 1"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01716"
FT DOMAIN 253..495
FT /note="ABC transporter 2"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01716"
FT BINDING 38..45
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01716"
SQ SEQUENCE 501 AA; 54732 MW; 21C914D5FBE2BC8A CRC64;
MTQAILQLSE IEKAFPGVKA LDKASLNVYP GRVMALMGEN GAGKSTLMKV LTGIYHMDAG
SIQYQGQPAA FKGPRDSQEA GISIIHQELN LIPELTIAEN IFLGREFTGS MGRIQWSKMY
AEADRLLQRL NVKHSSKTLL GDLSLGEQQM VEIAKALSFE SKVIIMDEPT DALTDTETES
LFKVINELRE QGCGIVYISH RLKEIFEICD DITVLRDGKF IGECRVADTD EDGLIEMMVG
RKLEEQYPRI DVKHGETCLE VVGLTGSGVH DVSFTLKRGE ILGISGLMGA GRTELMKVIY
GALPSEHGVI NLDNKTINPV SPQDGLANGI AYISEDRKGD GLVLGLSVKE NMSLCALDKL
TKGVQIQHGE EVIAVEDFIK LFNIKTPTRD QIIGNLSGGN QQKVAIAKGL MTKPKVLILD
EPTRGVDVGA KKEIYQLINK FKADGMSIIL VSSEMPEVLG MSDRILVMHE GRITGEFDAK
DADQEKLLAC AVGKKINEEA A