RBS_PSEUX
ID RBS_PSEUX Reviewed; 141 AA.
AC F4CQ78;
DT 10-FEB-2021, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 25-MAY-2022, entry version 43.
DE RecName: Full=Ribulose bisphosphate carboxylase small subunit {ECO:0000255|HAMAP-Rule:MF_00859, ECO:0000305|PubMed:23663433};
DE Short=RuBisCO small subunit {ECO:0000255|HAMAP-Rule:MF_00859, ECO:0000305|PubMed:23663433};
GN Name=cbbS {ECO:0000255|HAMAP-Rule:MF_00859};
GN Synonyms=ccbS {ECO:0000303|PubMed:23663433}; OrderedLocusNames=Psed_6250;
OS Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 /
OS CB1190).
OC Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC Pseudonocardia.
OX NCBI_TaxID=675635;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 55486 / DSM 44775 / JCM 13855 / CB1190;
RX PubMed=21725009; DOI=10.1128/jb.00415-11;
RA Sales C.M., Mahendra S., Grostern A., Parales R.E., Goodwin L.A., Woyke T.,
RA Nolan M., Lapidus A., Chertkov O., Ovchinnikova G., Sczyrba A.,
RA Alvarez-Cohen L.;
RT "Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans
RT strain CB1190.";
RL J. Bacteriol. 193:4549-4550(2011).
RN [2]
RP FUNCTION, AND INDUCTION.
RC STRAIN=ATCC 55486 / DSM 44775 / JCM 13855 / CB1190;
RX PubMed=23663433; DOI=10.1111/1462-2920.12144;
RA Grostern A., Alvarez-Cohen L.;
RT "RubisCO-based CO2 fixation and C1 metabolism in the actinobacterium
RT Pseudonocardia dioxanivorans CB1190.";
RL Environ. Microbiol. 15:3040-3053(2013).
CC -!- FUNCTION: RuBisCO catalyzes two reactions: the carboxylation of D-
CC ribulose 1,5-bisphosphate, the primary event in carbon dioxide
CC fixation, as well as the oxidative fragmentation of the pentose
CC substrate. Both reactions occur simultaneously and in competition at
CC the same active site. Although the small subunit is not catalytic it is
CC essential for maximal activity. {ECO:0000255|HAMAP-Rule:MF_00859,
CC ECO:0000305|PubMed:23663433}.
CC -!- SUBUNIT: Heterohexadecamer of 8 large and 8 small subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00859}.
CC -!- INDUCTION: Transcription is 18-fold up-regulated by growth on
CC H(2)/bicarbonate compared to pyruvate, RuBisCO activity is induced by
CC growth on H(2), H(2)/bicarbonate, formate, methanol and CO.
CC {ECO:0000269|PubMed:23663433}.
CC -!- MISCELLANEOUS: The basic functional RuBisCO is composed of a large
CC chain homodimer in a 'head-to-tail' conformation. In form I RuBisCO
CC this homodimer is arranged in a barrel-like tetramer with the small
CC subunits forming a tetrameric 'cap' on each end of the 'barrel'.
CC {ECO:0000255|HAMAP-Rule:MF_00859}.
CC -!- SIMILARITY: Belongs to the RuBisCO small chain family.
CC {ECO:0000255|HAMAP-Rule:MF_00859}.
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DR EMBL; CP002593; AEA28351.1; -; Genomic_DNA.
DR RefSeq; WP_013678238.1; NC_015312.1.
DR AlphaFoldDB; F4CQ78; -.
DR SMR; F4CQ78; -.
DR STRING; 675635.Psed_6250; -.
DR EnsemblBacteria; AEA28351; AEA28351; Psed_6250.
DR KEGG; pdx:Psed_6250; -.
DR eggNOG; COG4451; Bacteria.
DR HOGENOM; CLU_098114_2_0_11; -.
DR OMA; KQCQVLS; -.
DR OrthoDB; 1708389at2; -.
DR Proteomes; UP000007809; Chromosome.
DR GO; GO:0019253; P:reductive pentose-phosphate cycle; IEA:UniProtKB-KW.
DR CDD; cd03527; RuBisCO_small; 1.
DR Gene3D; 3.30.190.10; -; 1.
DR HAMAP; MF_00859; RuBisCO_S_bact; 1.
DR InterPro; IPR024681; RuBisCO_ssu.
DR InterPro; IPR000894; RuBisCO_ssu_dom.
DR InterPro; IPR036385; RuBisCO_ssu_sf.
DR PANTHER; PTHR31262; PTHR31262; 1.
DR Pfam; PF00101; RuBisCO_small; 1.
DR SMART; SM00961; RuBisCO_small; 1.
DR SUPFAM; SSF55239; SSF55239; 1.
PE 2: Evidence at transcript level;
KW Calvin cycle; Carbon dioxide fixation; Reference proteome.
FT CHAIN 1..141
FT /note="Ribulose bisphosphate carboxylase small subunit"
FT /id="PRO_0000452050"
SQ SEQUENCE 141 AA; 16029 MW; D9141463150536F8 CRC64;
MRITQGTFSY LPDFTDEEIT AQINYALTND WPLSVEFTDD PHPRNTYWEM WGLPMFDLRD
PAGVLMEVNA CRAANPNAYV RLNAYDASLG RQTTALSFIV QRPAEEPGFR LDRAEGRGRA
IGYTTHSYAT ERPVGDRYTQ G