RBTN2_XENLA
ID RBTN2_XENLA Reviewed; 158 AA.
AC Q90XH3;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Rhombotin-2;
DE AltName: Full=LIM domain only protein 2;
DE Short=LMO-2;
DE Short=Lmo2-A;
DE Short=xLMO-2;
GN Name=lmo2 {ECO:0000303|PubMed:17942750}; Synonyms=lmo2-a;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1] {ECO:0000305, ECO:0000312|EMBL:AAK54614.1}
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL
RP STAGE, AND INDUCTION.
RC TISSUE=Spleen {ECO:0000269|PubMed:11493549};
RX PubMed=11493549; DOI=10.1242/dev.128.12.2301;
RA Mead P.E., Deconinck A.E., Huber T.L., Orkin S.H., Zon L.I.;
RT "Primitive erythropoiesis in the Xenopus embryo: the synergistic role of
RT LMO-2, SCL and GATA-binding proteins.";
RL Development 128:2301-2308(2001).
RN [2] {ECO:0000312|EMBL:AAH97502.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Spleen {ECO:0000312|EMBL:AAH97502.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000305}
RP INDUCTION.
RX PubMed=17942750; DOI=10.1182/blood-2007-03-081323;
RA Walmsley M., Cleaver D., Patient R.K.;
RT "Fibroblast growth factor controls the timing of Scl, Lmo2, and Runx1
RT expression during embryonic blood development.";
RL Blood 111:1157-1166(2008).
CC -!- FUNCTION: Transcription factor that acts synergistically with tal1/scl
CC and gata1 to specify embryonic dorsal mesoderm to a hematopoietic fate.
CC Induces globin gene expression together with fgf.
CC {ECO:0000269|PubMed:11493549}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P25801}.
CC -!- TISSUE SPECIFICITY: Expression becomes restricted to the ventral blood
CC island (VBI) as the embryo develops. In late neurula and early tailbud
CC embryos, also expressed in the dorsal lateral plate (DLP), the site of
CC definitive hematopoiesis in the tadpole. Expression in the DLP
CC diminishes during tailbud stages. Expressed in circulating blood cells
CC of tadpoles. Also expressed in non-hematopoietic sites, including the
CC tailbud region and the central nervous system of early neurula embryos.
CC {ECO:0000269|PubMed:11493549}.
CC -!- DEVELOPMENTAL STAGE: Zygotic expression begins after gastrulation at
CC stage 12.5. {ECO:0000269|PubMed:11493549}.
CC -!- INDUCTION: By bmp-signaling. Inhibition by fgf regulates the timing of
CC hematopoiesis. {ECO:0000269|PubMed:11493549,
CC ECO:0000269|PubMed:17942750}.
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DR EMBL; AF374473; AAK54614.1; -; mRNA.
DR EMBL; BC097502; AAH97502.1; -; mRNA.
DR RefSeq; NP_001081112.1; NM_001087643.1.
DR AlphaFoldDB; Q90XH3; -.
DR SMR; Q90XH3; -.
DR DNASU; 394388; -.
DR GeneID; 394388; -.
DR KEGG; xla:394388; -.
DR CTD; 394388; -.
DR Xenbase; XB-GENE-6254426; lmo2.S.
DR OMA; NIVCEDH; -.
DR OrthoDB; 1307952at2759; -.
DR Proteomes; UP000186698; Chromosome 4S.
DR Bgee; 394388; Expressed in lung and 15 other tissues.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0032991; C:protein-containing complex; ISS:UniProtKB.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030218; P:erythrocyte differentiation; IGI:UniProtKB.
DR InterPro; IPR001781; Znf_LIM.
DR Pfam; PF00412; LIM; 2.
DR SMART; SM00132; LIM; 2.
DR PROSITE; PS00478; LIM_DOMAIN_1; 2.
DR PROSITE; PS50023; LIM_DOMAIN_2; 2.
PE 2: Evidence at transcript level;
KW Developmental protein; LIM domain; Metal-binding; Nucleus;
KW Reference proteome; Repeat; Zinc.
FT CHAIN 1..158
FT /note="Rhombotin-2"
FT /id="PRO_0000318112"
FT DOMAIN 28..90
FT /note="LIM zinc-binding 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00125"
FT DOMAIN 92..154
FT /note="LIM zinc-binding 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00125"
SQ SEQUENCE 158 AA; 18350 MW; 4C8BBFB69BC28853 CRC64;
MSSAIERKSL DPADEPVDEV LQIPPSLLTC GGCQQSIGDR YFLKAIDQYW HEDCLSCDLC
GCRLGEVGRR LYYKLGRKLC RRDYLRLFGQ DGLCASCDNR IRAYEMTMRV KDKVYHLECF
KCAACQKHFC VGDRYLLINS DIVCEQDIYE WTKLSEMM