RBTN2_XENTR
ID RBTN2_XENTR Reviewed; 158 AA.
AC Q5M8V8;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Rhombotin-2;
DE AltName: Full=LIM domain only protein 2;
DE Short=LMO-2;
GN Name=lmo2 {ECO:0000312|EMBL:AAH87809.1};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1] {ECO:0000312|EMBL:AAH87809.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=F6 {ECO:0000312|EMBL:AAH87809.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor that acts synergistically with tal1/scl
CC and gata1 to specify embryonic dorsal mesoderm to a hematopoietic fate.
CC Induces globin gene expression together with fgf (By similarity).
CC {ECO:0000250|UniProtKB:Q90XH3}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:P25801}.
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DR EMBL; BC087809; AAH87809.1; -; mRNA.
DR RefSeq; NP_001011238.1; NM_001011238.2.
DR AlphaFoldDB; Q5M8V8; -.
DR SMR; Q5M8V8; -.
DR STRING; 8364.ENSXETP00000016228; -.
DR PaxDb; Q5M8V8; -.
DR DNASU; 496679; -.
DR GeneID; 496679; -.
DR KEGG; xtr:496679; -.
DR CTD; 4005; -.
DR Xenbase; XB-GENE-479144; lmo2.
DR eggNOG; KOG0490; Eukaryota.
DR HOGENOM; CLU_001357_3_1_1; -.
DR InParanoid; Q5M8V8; -.
DR OMA; NIVCEDH; -.
DR OrthoDB; 1307952at2759; -.
DR PhylomeDB; Q5M8V8; -.
DR TreeFam; TF351071; -.
DR Reactome; R-XTR-8939236; RUNX1 regulates transcription of genes involved in differentiation of HSCs.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR ExpressionAtlas; Q5M8V8; differential.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0032991; C:protein-containing complex; ISS:UniProtKB.
DR GO; GO:0140297; F:DNA-binding transcription factor binding; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003713; F:transcription coactivator activity; IBA:GO_Central.
DR GO; GO:0030218; P:erythrocyte differentiation; ISS:UniProtKB.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR001781; Znf_LIM.
DR Pfam; PF00412; LIM; 2.
DR SMART; SM00132; LIM; 2.
DR PROSITE; PS00478; LIM_DOMAIN_1; 2.
DR PROSITE; PS50023; LIM_DOMAIN_2; 2.
PE 2: Evidence at transcript level;
KW Developmental protein; LIM domain; Metal-binding; Nucleus;
KW Reference proteome; Repeat; Zinc.
FT CHAIN 1..158
FT /note="Rhombotin-2"
FT /id="PRO_0000318113"
FT DOMAIN 28..90
FT /note="LIM zinc-binding 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00125"
FT DOMAIN 92..154
FT /note="LIM zinc-binding 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00125"
SQ SEQUENCE 158 AA; 18405 MW; 1DDEF04C6F729A46 CRC64;
MSSAIERKSL DPTDEPVDEV LQIPPSLLTC GGCQQSIGDR YFLKAIDQYW HEDCLSCDLC
GCRLGEVGRR LYYKLGRKLC RRDYLRLFGQ DGLCASCDKR IRAFEMTMRV KDKVYHLECF
KCAACQKHFC VGDRYLLINS DIVCEQDIYE WTKLNEMM