RC21_ARATH
ID RC21_ARATH Reviewed; 52 AA.
AC Q9FE70; Q1PFJ5;
DT 14-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 101.
DE RecName: Full=UPF0057 membrane protein At1g57550;
GN OrderedLocusNames=At1g57550; ORFNames=F25P12.2, T8L23.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UPF0057 (PMP3) family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC009323; AAG09091.1; -; Genomic_DNA.
DR EMBL; AC079733; AAG50736.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33434.1; -; Genomic_DNA.
DR EMBL; DQ446368; ABE65718.1; -; mRNA.
DR PIR; D96609; D96609.
DR RefSeq; NP_176067.1; NM_104551.2.
DR AlphaFoldDB; Q9FE70; -.
DR BioGRID; 27355; 27.
DR IntAct; Q9FE70; 21.
DR STRING; 3702.AT1G57550.1; -.
DR PaxDb; Q9FE70; -.
DR EnsemblPlants; AT1G57550.1; AT1G57550.1; AT1G57550.
DR GeneID; 842130; -.
DR Gramene; AT1G57550.1; AT1G57550.1; AT1G57550.
DR KEGG; ath:AT1G57550; -.
DR Araport; AT1G57550; -.
DR TAIR; locus:2027518; AT1G57550.
DR eggNOG; KOG1773; Eukaryota.
DR HOGENOM; CLU_107649_6_2_1; -.
DR InParanoid; Q9FE70; -.
DR OMA; DRIPKRM; -.
DR OrthoDB; 1623763at2759; -.
DR PhylomeDB; Q9FE70; -.
DR PRO; PR:Q9FE70; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FE70; baseline and differential.
DR Genevisible; Q9FE70; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR000612; PMP3.
DR PANTHER; PTHR21659; PTHR21659; 1.
DR Pfam; PF01679; Pmp3; 1.
DR PROSITE; PS01309; UPF0057; 1.
PE 3: Inferred from homology;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..52
FT /note="UPF0057 membrane protein At1g57550"
FT /id="PRO_0000193974"
FT TRANSMEM 4..24
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 30..50
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 52 AA; 5842 MW; 893BD610A349A08D CRC64;
MGSFLEVLCA IFIPPVGVFL RYGLGLEFWV CLLLTLFAFI PGLIYAIYVL TK