RDGA_PECCC
ID RDGA_PECCC Reviewed; 244 AA.
AC Q47587;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 25-MAY-2022, entry version 78.
DE RecName: Full=HTH-type transcriptional regulator RdgA;
GN Name=rdgA;
OS Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp.
OS carotovora).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Pectobacterium.
OX NCBI_TaxID=555;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=71;
RX PubMed=7715460; DOI=10.1111/j.1365-2958.1994.tb01334.x;
RA Liu Y., Chatterjee A., Chatterjee A.K.;
RT "Nucleotide sequence, organization and expression of rdgA and rdgB genes
RT that regulate pectin lyase production in the plant pathogenic bacterium
RT Erwinia carotovora subsp. carotovora in response to DNA-damaging agents.";
RL Mol. Microbiol. 14:999-1010(1994).
CC -!- FUNCTION: Regulates pectin lyase production in response to DNA damage.
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DR EMBL; L32173; AAA24865.1; -; Genomic_DNA.
DR PIR; S61398; S61398.
DR AlphaFoldDB; Q47587; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR CDD; cd06529; S24_LexA-like; 1.
DR Gene3D; 1.10.260.40; -; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR039418; LexA-like.
DR InterPro; IPR036286; LexA/Signal_pep-like_sf.
DR InterPro; IPR015927; Peptidase_S24_S26A/B/C.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF00717; Peptidase_S24; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; SSF47413; 1.
DR SUPFAM; SSF51306; SSF51306; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding; Transcription; Transcription regulation.
FT CHAIN 1..244
FT /note="HTH-type transcriptional regulator RdgA"
FT /id="PRO_0000149733"
FT DOMAIN 9..62
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00257"
FT DNA_BIND 20..39
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00257"
SQ SEQUENCE 244 AA; 26785 MW; 256E445E54E9BD04 CRC64;
MKTTLAERLK TARTAQGLSQ KALGDMIGVS QAAIQKIEVG KASQTTKIVE LSNNLRVRPE
WLANGEGPMR SSEVTRSLQE PSIPPKSEWG TVSAWDSTTE LSEDEVEVPF LKDIEFACGD
GRIQSEDYNG FKLRFSKATL RKVGANTDGS GVLCFPAAGD SMEPIIPDGT TVAVDTNNKR
IIDGKLYAIA QEGGGNDKLK RIKQLYRKPG GLLTIHSFNR ETDEEAYESD VEIIGRVFWY
SVLL