RDM1_CHICK
ID RDM1_CHICK Reviewed; 277 AA.
AC Q8JFQ4; Q2L4W7;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=RAD52 motif-containing protein 1;
GN Name=RDM1;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, RNA-BINDING, AND DNA-BINDING.
RC TISSUE=Bursa of Fabricius;
RX PubMed=15611051; DOI=10.1074/jbc.m412874200;
RA Hamimes S., Arakawa H., Stasiak A.Z., Kierzek A.M., Hirano S., Yang Y.-G.,
RA Takata M., Stasiak A., Buerstedde J.M., Van Dyck E.;
RT "RDM1, a novel RNA recognition motif (RRM)-containing protein involved in
RT the cell response to cisplatin in vertebrates.";
RL J. Biol. Chem. 280:9225-9235(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC TISSUE=Liver;
RX PubMed=16916790; DOI=10.1093/nar/gkl469;
RA Shimada N., Matsudo H., Osano K., Arakawa H., Buerstedde J.-M.,
RA Matsumoto Y., Chayahara K., Torihata A., Ono M.;
RT "Activation of the chicken Ig-beta locus by the collaboration of scattered
RT regulatory regions through changes in chromatin structure.";
RL Nucleic Acids Res. 34:3794-3802(2006).
RN [3]
RP FUNCTION, SUBUNIT, MUTAGENESIS OF 119-LEU--PHE-121, RNA-BINDING, AND
RP DNA-BINDING.
RX PubMed=16630539; DOI=10.1016/j.bbrc.2006.03.154;
RA Hamimes S., Bourgeon D., Stasiak A.Z., Stasiak A., Van Dyck E.;
RT "Nucleic acid-binding properties of the RRM-containing protein RDM1.";
RL Biochem. Biophys. Res. Commun. 344:87-94(2006).
CC -!- FUNCTION: Confers resistance to the antitumor agent cisplatin. Binds
CC preferentially to sites of DNA modified by cisplatin in vitro. Binds to
CC double-stranded DNA in a cooperative manner resulting in the formation
CC of filament-like structures. Binds to single-stranded DNA with no
CC cooperativity. Binds to RNA. {ECO:0000269|PubMed:15611051,
CC ECO:0000269|PubMed:16630539}.
CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:16630539}.
CC -!- SUBCELLULAR LOCATION: Nucleus. Cytoplasm. Nucleus, nucleolus
CC {ECO:0000250}.
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DR EMBL; AB080727; BAC02561.1; -; mRNA.
DR EMBL; AB248100; BAE78658.1; -; Genomic_DNA.
DR RefSeq; NP_989877.2; NM_204546.2.
DR AlphaFoldDB; Q8JFQ4; -.
DR SMR; Q8JFQ4; -.
DR STRING; 9031.ENSGALP00000000321; -.
DR PaxDb; Q8JFQ4; -.
DR GeneID; 395228; -.
DR KEGG; gga:395228; -.
DR CTD; 201299; -.
DR VEuPathDB; HostDB:geneid_395228; -.
DR eggNOG; ENOG502RXM9; Eukaryota.
DR InParanoid; Q8JFQ4; -.
DR OrthoDB; 1475838at2759; -.
DR PhylomeDB; Q8JFQ4; -.
DR PRO; PR:Q8JFQ4; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProt.
DR CDD; cd12364; RRM_RDM1; 1.
DR Gene3D; 3.30.390.80; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR041247; Rad52_fam.
DR InterPro; IPR042525; Rad52_Rad59_Rad22_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR040224; RDM1.
DR InterPro; IPR034200; RDM1_RRM.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR31164; PTHR31164; 1.
DR Pfam; PF04098; Rad52_Rad22; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50102; RRM; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; DNA-binding; Nucleus; Reference proteome; RNA-binding.
FT CHAIN 1..277
FT /note="RAD52 motif-containing protein 1"
FT /id="PRO_0000299531"
FT DOMAIN 15..95
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT MUTAGEN 119..121
FT /note="LGF->AAA: Inhibits partially single-stranded DNA-
FT binding activity but not homodimerization."
FT /evidence="ECO:0000269|PubMed:16630539"
FT CONFLICT 29
FT /note="E -> K (in Ref. 2; BAE78658)"
FT /evidence="ECO:0000305"
FT CONFLICT 87
FT /note="P -> A (in Ref. 2; BAE78658)"
FT /evidence="ECO:0000305"
FT CONFLICT 187
FT /note="G -> V (in Ref. 2; BAE78658)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 277 AA; 30268 MW; 7DFA47F596CBF4E2 CRC64;
MAEVLEFRVP AGSAQTLLVW GLEPTVGLEH SLFSVFSKFG LLYSVRVHSN AAVAGPGCYA
IIKFYSAADA SRAQHACNGQ RLFQNSPLKV CVCTKQKGFQ QQVLALNSNK CQELANHYLG
FNGWSSRIIT LQNVSGFDDE NEEVGKKRSV RYLCAVEVTL PNHGVRTRGV GLGEADVESG
EDPLEFGTAT RRVQKLAVGK ALSSAFQKIL LVVLESGKVA VEYNHAAEEP TDSLTEEELE
GLVQVSELPL EPFDLEEEVL SDLTLDDELP VWEVPSN