RDRP_AQRVG
ID RDRP_AQRVG Reviewed; 1274 AA.
AC B2BNE0;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 20-MAY-2008, sequence version 1.
DT 29-SEP-2021, entry version 41.
DE RecName: Full=RNA-directed RNA polymerase VP2;
DE EC=2.7.7.48;
GN Name=S2;
OS Aquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G).
OC Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes;
OC Reovirales; Reoviridae; Spinareovirinae; Aquareovirus.
OX NCBI_TaxID=648234;
OH NCBI_TaxID=7959; Ctenopharyngodon idella (Grass carp) (Leuciscus idella).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=18191982; DOI=10.1016/j.virol.2007.12.006;
RA Mohd Jaafar F., Goodwin A.E., Belhouchet M., Merry G., Fang Q.,
RA Cantaloube J.F., Biagini P., de Micco P., Mertens P.P., Attoui H.;
RT "Complete characterisation of the American grass carp reovirus genome
RT (genus Aquareovirus: family Reoviridae) reveals an evolutionary link
RT between aquareoviruses and coltiviruses.";
RL Virology 373:310-321(2008).
CC -!- FUNCTION: RNA-directed RNA polymerase that is involved in transcription
CC and genome replication. Following infection, it catalyzes the synthesis
CC of fully conservative plus strands. After core assembly, which consists
CC in recruitment of one capped plus-strand for each genomic segments and
CC polymerase complexes, the polymerase switches mode and catalyzes the
CC synthesis of complementary minus-strands (By similarity).
CC {ECO:0000255|PROSITE-ProRule:PRU00539}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the reoviridae RNA-directed RNA polymerase
CC family. {ECO:0000305}.
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DR EMBL; EF589099; ABV01040.1; -; Genomic_RNA.
DR RefSeq; YP_001837095.1; NC_010585.1.
DR SMR; B2BNE0; -.
DR GeneID; 6218800; -.
DR KEGG; vg:6218800; -.
DR Proteomes; UP000001674; Genome.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0019079; P:viral genome replication; IEA:InterPro.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR012915; RdRP_5.
DR InterPro; IPR007097; RNA-dir_pol_reovirus.
DR Pfam; PF07925; RdRP_5; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS50523; RDRP_DSRNA_REO; 1.
PE 3: Inferred from homology;
KW Hydrolase; Nucleotide-binding; Nucleotidyltransferase; Reference proteome;
KW RNA-directed RNA polymerase; Transferase; Viral RNA replication; Virion.
FT CHAIN 1..1274
FT /note="RNA-directed RNA polymerase VP2"
FT /id="PRO_0000404173"
FT DOMAIN 550..798
FT /note="RdRp catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
SQ SEQUENCE 1274 AA; 141975 MW; 3803AF205C265808 CRC64;
MEDLFNALPQ PLQQLSLALA GEIPLNDELF QAAASTWHTR QRSETYHLLD RLRFSTPIVT
PQAIYRDLPW RNCYRINQDR VERIPTTNAS DDVYVPNSDI STLLSPLFSI PTYGTLHPSI
EKDALELRAD SARCASTFYK IASSQARQVK LDPTRMLEFL LLLVATPRVN SGLDTDQPSM
RDPTKSPALH AIWQIMQYYK VDSKYHAPAL IVSTGAVWWI PPPGKRNVVS VQYLLTDLVN
LAIIARMTDM HPTLGLCAAR VYIQAATTDS YTHTLLKLKG VFPALSIHSM YRQKGFGGKA
PDIQWTEPRT KYQFKWVGVT HLHDGLRPRA PVRDEAVRKL LTEYQLADIM APIVEMRNQH
KHHDHDSVRF VRDVMALTSG MYLVRQPTMS VLQEYSQVPD IKQPIPPSAW TGTVGNVRYL
NKDVTGPARW LYNTWREAAQ EIAQDRTWHD PVNQFIMGSQ YVTARGGSGS SLKHSLTVTG
LVLPEFSESS VKRSSKIYQA AQIARIPFTL LTAAIHAEVV MAIRNQVQRR ARSIMPLNVV
QQAVSAPHTL VANYINKHMN MSTTSGSVVT DKVVPLLLYA STPPRTVVNV DIKACDASIT
YDYFLSLICG AMHEGFEVGD NHASFMGVPS SIIMDKRSAL APYSRTVSGL QTMVQHLSQM
YANGFRYSVT DAFSSGNKFS FPTSTFPSGS TATSTEHTAN NSTMMSYFLA VHAPQHIKSP
NMKRVLSDMT IQRNYVCQGD DGVLLLPDEA ASKISAEDMD ELLTCLKDYG TSFGWVYDID
WSDSAEYLKL FALCGCRVPN VSRHPPVGKE YASPTTDEIW PSLIDIVVGH HLNGVMDLMN
WREWLRFSWA FACYASRGAY TDKYGETHIA QYPWWTFVYL GIPPILLPGQ TPFIHSLFMP
PGDQAMFAIL NNWRDLISTN TTTTFPPLKH PHHTWHLADV PTLLDSYGVY AGYHAAQHPR
RPVAQPETAN SESIEQITGA LTDYLLYDPI LKARVNTGRH NWSQLSQSIG LNIGGRVPSL
MDVPGKWVAA GREAEKPPPS AIVYMFKSLN RTIRRPSKHF SKLLELYIRV KVVLGAPKPL
AIDPDIPQVA GADPHNDDPW FKYVGLGDIP TSTRRYFGES LFVGRVVSGL DVEAVDAALL
RLKILGAPPA AYIALLNGIG MSNSEANQIA GRVSLANAQT VQIGRVVNLS TPSSWMTLDT
APYIQYHTYD FKPGVTNPSA QSREKFIWLS PILKLLCATA AMSIAGPVRE AYVLDIHGSA
ASLSGNFREW MRAA