RDRP_CMVB
ID RDRP_CMVB Reviewed; 857 AA.
AC Q66136;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 29-SEP-2021, entry version 64.
DE RecName: Full=RNA-directed RNA polymerase 2a;
DE Short=protein 2a;
DE EC=2.7.7.48;
GN ORFNames=ORF2a;
OS Cucumber mosaic virus (strain B) (CMV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Bromoviridae; Cucumovirus.
OX NCBI_TaxID=117119;
OH NCBI_TaxID=3659; Cucumis sativus (Cucumber).
OH NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH NCBI_TaxID=3562; Spinacia oleracea (Spinach).
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Jang H., Choi Y., Kim C.;
RL Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-dependent RNA polymerase which replicates the viral
CC genome composed of 3 RNA segments, RNA1, RNA2 and RNA3. {ECO:0000305}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
CC -!- SUBUNIT: Interacts with replication protein 1a. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ssRNA positive-strand viruses RNA-directed
CC RNA polymerase family. {ECO:0000305}.
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DR EMBL; U59740; AAB03187.1; -; mRNA.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR InterPro; IPR001788; Tymovirus_RNA-dep_RNA_pol.
DR Pfam; PF00978; RdRP_2; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 2: Evidence at transcript level;
KW Nucleotide-binding; Nucleotidyltransferase; RNA-directed RNA polymerase;
KW Transferase; Viral RNA replication.
FT CHAIN 1..857
FT /note="RNA-directed RNA polymerase 2a"
FT /id="PRO_0000083272"
FT DOMAIN 511..624
FT /note="RdRp catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
FT REGION 775..857
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 801..840
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 857 AA; 96787 MW; 1A73576286E29547 CRC64;
MAFPAPAFSL ANLLNGSYGV DTPEDMERLR SEQREEAAAA CRNYRPLPAV DVSESVTEDA
HSLQTPDGAP AEAVSDEFVT YGAEDYLEKS DDELLVAFET MVKPMRIGQL WCPAFNKCSF
ISSIAMARAL LLAPRTSHRT MKCFEDLVAA IYTKSDFYYS EECEADDVQM DISSRDVPGY
SFEPWSRTSG FEPPPICEAC DMIMYQCPCF DFNALKKPCA ERTFADDYVI EGLDGVVDNA
TLLSNLGPFL VPVKCQYEKC PTPTIAIPPN LNRATDRVDI NLVQSICDST LPTHSNYDDS
FHQVFVESAD YSIDLDHVRL RQSDLIAKIP DSGHMIPVLN TGSGHKRVGT TKEVLTAIKK
RNADVPELGD SVNLSRLSKA VAERFFISYI NGNSLASSNF VNVVSNFHDY MEKWKSSGLS
YDDLPDLHAE NLQFYDHMIK SDVKPVVSDT LNIDRPVPAT ITYHKKSITS QFSPLFTALF
ERFQRCLRER IILPVGKISS LEMAGFDVKN KYCLEIDLSK FDKSQGEFHL LIQEHILNGL
GCPAPITKWW CDFHRFSYIR DRRAGVGMPI SFQRRTGDAF TYFGNTIVTM AEFAWCYDTD
QFEKLLFSGD DSLGFSQLPP VGDSSKFTTL YNMEAKVMEP SVPYICSKFL LSDEFGNTFS
VPDPLREVQR LGTKKIPYSD NDEFLFAHFM QFVDRLKFLD RMSQSCIDQL SIFFELKYKK
SGEEAALMLG AFKKYTANFQ SYKELYYSDR RQCELINSFC ISEFRVERVN SNKQRKKHGI
ERRCNDKRRT PTGSYGGGEE AETKVSQTES TGTRSQKSQR ESAFKSQTVP LPTVLSSGRS
GTDRVIPPCE RGEGTRA