RDRP_CMVK
ID RDRP_CMVK Reviewed; 858 AA.
AC Q86783;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 29-SEP-2021, entry version 65.
DE RecName: Full=RNA-directed RNA polymerase 2a;
DE Short=protein 2a;
DE EC=2.7.7.48;
GN ORFNames=ORF2a;
OS Cucumber mosaic virus (strain K) (CMV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Bromoviridae; Cucumovirus.
OX NCBI_TaxID=117115;
OH NCBI_TaxID=3659; Cucumis sativus (Cucumber).
OH NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH NCBI_TaxID=3562; Spinacia oleracea (Spinach).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=8046419; DOI=10.1099/0022-1317-75-8-2121;
RA Hellwald K.H., Palukaitis P.;
RT "Nucleotide sequence and infectivity of cucumber mosaic cucumovirus (strain
RT K) RNA2 involved in breakage of replicase-mediated resistance in tobacco.";
RL J. Gen. Virol. 75:2121-2125(1994).
CC -!- FUNCTION: RNA-dependent RNA polymerase which replicates the viral
CC genome composed of 3 RNA segments, RNA1, RNA2 and RNA3. {ECO:0000305}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539};
CC -!- SUBUNIT: Interacts with replication protein 1a. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ssRNA positive-strand viruses RNA-directed
CC RNA polymerase family. {ECO:0000305}.
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DR EMBL; S72187; AAB31463.1; -; Genomic_RNA.
DR PRIDE; Q86783; -.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR InterPro; IPR001788; Tymovirus_RNA-dep_RNA_pol.
DR Pfam; PF00978; RdRP_2; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding; Nucleotidyltransferase; RNA-directed RNA polymerase;
KW Transferase; Viral RNA replication.
FT CHAIN 1..858
FT /note="RNA-directed RNA polymerase 2a"
FT /id="PRO_0000083276"
FT DOMAIN 511..624
FT /note="RdRp catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539"
FT REGION 772..830
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 772..794
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 805..824
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 858 AA; 96818 MW; 33610ADCE43C327B CRC64;
MAFPAPAFSL ANLLNGSYGV DTPEEVERVR SEQREEAAAA CRNYRPLPAV DVSESVPEDA
HSLRTPDGAP SEEVSVEFVT YGAEDYLEKS DDELLVAFET MVKPMRIGQL WCPAFNKCSF
ISSIAMARAL LLAPRTSHRT MKCFEDLVAA IYTKSDFYYD DECEADDVQI DISSRDVPGY
SFEPWSRTSG FEPPPICEAC DMIMYQCPCF DFNALKKSCA ERTFADDYVI EGLDGVVDNA
TLLSNLGPFL VPVKCQYEKC PTPTVANPPS LNRATDRVDI NLVQSICDST LPTHSNYDDS
FHQVFVESAD YSIDLDHVRL RQSDLIAKIP DSGHMIPVLN TGSGHKRVGT TKEVLTAIKK
RNADVPELGD SVNLSRLSKA VAERFFISYI NGNSLASSNF VNVVSNFHDY MEKWKSSGLS
YDDLPDLHAE NLQFYDHMIK SDVKPVVSDT LNIDRPVPAT ITYHKKGITS QFSPLFTALF
ERFQRCLRER IILPVGKISS LEMAGFDVKN KHCLEIDLSK FDKSQGEFHL MIQEHILNGL
GCPAPITKWW CDFHRFSYIR DRRAGVGMPI SFQRRTGDAF TYFGNTIVTM AEFAWCYDTD
QFEKLLFSGD DSLGFSVLPP VGDPSKFTTL FNMEAKVMEP AVPYICSKFL LSDEFGNTFS
VPDPLREVQR LGTKKIPYSD NDEFLFAHFM SFVDRLKFLD RMTQSCIDQL SLFFELKYRK
SGAEAALMLG AFKKYTANFQ SYKELYYSDR RQCELINSFS CVELRIERSS STKQRKKKDG
IERRRDDKRR TPTGSYGGGE EAETKVSQAE STGTRSQKSQ REGAFKSQAV PLPTILSSRW
FGTDRDVPPC EHGGIVRV