RDRP_HV19S
ID RDRP_HV19S Reviewed; 835 AA.
AC O57044;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 06-MAR-2007, sequence version 2.
DT 29-SEP-2021, entry version 60.
DE RecName: Full=Probable RNA-directed RNA polymerase;
DE EC=2.7.7.48;
OS Helminthosporium victoriae virus-190S (Hv190SV).
OC Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes;
OC Ghabrivirales; Totiviridae; Victorivirus.
OX NCBI_TaxID=45237;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=8901618; DOI=10.1073/pnas.93.22.12541;
RA Huang S., Ghabrial S.A.;
RT "Organization and expression of the double-stranded RNA genome of
RT Helminthosporium victoriae 190S virus, a totivirus infecting a plant
RT pathogenic filamentous fungus.";
RL Proc. Natl. Acad. Sci. U.S.A. 93:12541-12546(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA Ghbarial S.A., Nibert M., Xu L.L., Talkington M.W.T.;
RT "Victorivirus: a new genus in the family Totiviridae.";
RL Submitted (JAN-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP EXPRESSION.
RX PubMed=10623763; DOI=10.1128/jvi.74.2.997-1003.2000;
RA Soldevila A.I., Ghabrial S.A.;
RT "Expression of the Totivirus Helminthosporium victoriae 190S virus RNA-
RT dependent RNA polymerase from its downstream open reading frame in
RT dicistronic constructs.";
RL J. Virol. 74:997-1003(2000).
CC -!- FUNCTION: RNA-dependent RNA polymerase which replicates the viral
CC genome. Catalyzes the transcription of fully conservative plus-strand
CC genomic RNAs that are extruded from the virion into the cytoplasm where
CC they function as mRNAs for translation of viral proteins and also as
CC substrates for encapsidation to form new virions. Once encapsidated,
CC the positive strand is converted to dsRNA by the RNA-directed RNA
CC polymerase (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.48;
CC -!- MISCELLANEOUS: RDRP is released as a separate protein consequent to an
CC apparently coupled termination-reinitiation mechanism.
CC -!- SIMILARITY: Belongs to the totiviridae RNA-directed RNA polymerase
CC family. {ECO:0000305}.
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DR EMBL; U41345; AAB94791.2; -; Genomic_RNA.
DR RefSeq; NP_619670.2; NC_003607.2.
DR PRIDE; O57044; -.
DR GeneID; 940192; -.
DR KEGG; vg:940192; -.
DR Proteomes; UP000000352; Genome.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003968; F:RNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001795; RNA-dir_pol_luteovirus.
DR Pfam; PF02123; RdRP_4; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
PE 3: Inferred from homology;
KW Hydrolase; Nucleotide-binding; Nucleotidyltransferase; Reference proteome;
KW RNA-binding; RNA-directed RNA polymerase; Transferase;
KW Viral RNA replication.
FT CHAIN 1..835
FT /note="Probable RNA-directed RNA polymerase"
FT /id="PRO_0000404512"
SQ SEQUENCE 835 AA; 91320 MW; 5219337910812FB4 CRC64;
MSDPQERSKA YGLLGERLYA VASANSHMLA GYDSLDFTAR LVRLTGEATA LKAVDPLLPC
AVSLLFMDFP LQLPCTPEET LRLVRRAYDP NTLEEVDYST LSGYATQFAR VKGQRGRWRH
LGHLVCNDKA FRERYFPKKK HAAAAIKTNI RLGPLARAWA ARYGLAALGS HLAYMVGMPN
DRACATLLLA QTYKARFGSE GVAWAIASVR QPENAKGLSN ALKALGSNTS EPGALFVEAN
TLQGRYDRTL DMDHEVESRC SPAAIADQVI PYTDELGACI DFILDTELGG DTIELPDEDE
WWTSRWLWCV NGSQNALSDK ALGIKNKSGQ RYRRMAAEEV NNNPVPAWNG HTSVSPSVKL
ENGKDRAIFA CDTRSYFAFT YWLTPIEKKW RGARVILNPG EGGLYGTARR IRGSQTSGGV
NLMLDYDNFN SQHSNETMAA LYEKALSRTN APAYLKKAVA ASVESTYIHY KGRDRHVLGT
LMSGHRATTF TNSVLNAAYI CYAVGIPAFK RMISLHAGDD VYLRLPTLAD CATTLNNTKR
VGCRMNPTKQ SIGYTGAEFL RLGINKSYAI GYLCRAIASL VSGSWTSLDE LQPLNALNGA
IVQTRSCLNR GAATGLPELI SASFVGLRGF KRRDLLELLT GVATIKPGPV YTSSCVIREY
VVEQPPPPQF DVPPGAGMHA TMSYLARHTT LVEAQALEIA RPAIKSLMLS SSYGKAGPGA
QTRPHVPMPK LRRQPPRVAV GFSMAHELTG RGVKEGCLSG HPLLRLFEQR LTDDDLRALV
ALVGGNTSAK DIRAEAFGAE SSSSTIMGIL PHSDASNYCK RTRNGNIIVP YHIRS